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Dimeric Archeal Rubisco from Hyperthermus butylicus

Analyse Dimeric Archeal Rubisco from Hyperthermus butylicus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6HUN
Type: protein
Length: 428 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.802
Source: Hyperthermus butylicus DSM 5456
Molecule: Ribulose bisphosphate carboxylase
EC: 4.1.1.39
UniProt: A2BK54
Ligands: CA
Pockets: 4 · best druggability 0.43

Structure

x-ray diffraction · resolution 1.802 · 1 distinct chain · 43% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribulose bisphosphate carboxylase (EC 4.1.1.39)	protein	428	43% helix, 17% strand	A2BK54

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	165	0.43	0.74	24	empty
2	117	0.37	0.74	28	CA
3	94	0.37	0.75	15	empty
4	62	0.31	0.74	13	empty

Compared structures

6HUN · Dimeric archeal rubisco from hyperthermus butylicus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A2BK54
Elsewhere: RCSB PDB 6HUN · PDBe 6HUN · UniProt A2BK54

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