Research workbench
AlphaFold monomer V2.0 prediction for zwei ig domain protein zig-8 (G5ED00)
Analyse AlphaFold monomer V2.0 prediction for zwei ig domain protein zig-8 (G5ED00) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G5ED00
- Type
- protein
- Length
- 268 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Zwei ig domain protein zig-8
- UniProt
- G5ED00
- Pockets
- 5 · best druggability 0.58
Structure
1 distinct chain · 9% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zwei ig domain protein zig-8 | protein | 268 | 9% helix, 40% strand | G5ED00 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 359 | 0.58 | 0.76 | 43 | empty |
| 2 | 74 | 0.42 | 0.80 | 22 | empty |
| 3 | 50 | 0.34 | 0.79 | 11 | empty |
| 4 | 70 | 0.32 | 0.75 | 15 | empty |
| 5 | 62 | 0.29 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 6PLL · Crystal structure of the zig-8 IG1 homodimer · an experimental structure of the same protein · chain A against A, TM-score 0.44
- 6PLL · Crystal structure of the ZIG-8 IG1 homodimer · an experimental structure of the same protein · chain A against A, TM-score 0.44
- 6ON9 · Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, tetragonal form · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 6ON9 · Crystal structure of the zig-8-rig-5 IG1-IG1 heterodimer, tetragonal form · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 6ONB · Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, monoclinic form · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 6ONB · Crystal structure of the zig-8-rig-5 IG1-IG1 heterodimer, monoclinic form · an experimental structure of the same protein · chain A against A, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G5ED00
- Elsewhere: UniProt G5ED00 · AlphaFold DB G5ED00
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