MolNFT v1 · #159366 · protein
Crystal structure of the zig-8-rig-5 IG1-IG1 heterodimer, monoclinic form
6ONB: “Crystal structure of the zig-8-rig-5 IG1-IG1 heterodimer, monoclinic form”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #159366 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ONB
- Type
- protein
- Length
- 449 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G5ED00, C6KRM7
- Ligands
- NAG, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 116 | — | G5ED00 |
| B | — | protein | 110 | — | C6KRM7 |
| C | — | protein | 114 | — | G5ED00 |
| D | — | protein | 109 | — | C6KRM7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains B, D
- SO4 · Sulfate ion · ion · 5 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ONB · Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, monoclinic form · the same entry in another collection · chain A against A, TM-score 1.00
- G5ED00 · AlphaFold monomer V2.0 prediction for zwei ig domain protein zig-8 (G5ED00) · a predicted model of the same protein · chain C against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G5ED00
- Every structure of UniProt C6KRM7
- Elsewhere: RCSB PDB 6ONB · PDBe 6ONB · UniProt G5ED00 · UniProt C6KRM7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.