MolNFT v1 · #160478 · protein

Crystal structure of the zig-8 IG1 homodimer

6PLL: “Crystal structure of the zig-8 IG1 homodimer”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #160478 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6PLL
Type: protein
Length: 349 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: G5ED00
Ligands: NAG, SO4

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	118	—	G5ED00
B	—	protein	116	—	G5ED00
C	—	protein	115	—	G5ED00

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains C
SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6PLL · Crystal structure of the ZIG-8 IG1 homodimer · the same entry in another collection · chain A against A, TM-score 1.00
G5ED00 · AlphaFold monomer V2.0 prediction for zwei ig domain protein zig-8 (G5ED00) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G5ED00
Elsewhere: RCSB PDB 6PLL · PDBe 6PLL · UniProt G5ED00

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