Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized protein AT5G48480 (Q9LV66)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized protein AT5G48480 (Q9LV66) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LV66
- Type
- protein
- Length
- 166 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x260D6D743e9CB293CAd7D5d61915104457dde2eD
- Molecule
- Uncharacterized protein AT5G48480
- UniProt
- Q9LV66
- Pockets
- 1 · best druggability 0.38
Structure
1 distinct chain · 18% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein AT5G48480 | protein | 166 | 18% helix, 28% strand | Q9LV66 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 108 | 0.38 | 0.75 | 19 | empty |
Compared structures
- 1XY7 · X-ray structure of gene product from arabidopsis thaliana AT5G48480 · an experimental structure of the same protein · chain A against B, TM-score 0.71
- 1XY7 · X-ray structure of gene product from arabidopsis thaliana AT5G48480 · an experimental structure of the same protein · chain A against B, TM-score 0.71
- 2Q48 · Ensemble refinement of the protein crystal structure of gene product from arabidopsis… · an experimental structure of the same protein · chain A against B, TM-score 0.70
- 2Q48 · Ensemble refinement of the protein crystal structure of gene product from Arabidopsis… · an experimental structure of the same protein · chain A against B, TM-score 0.70
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LV66
- Elsewhere: UniProt Q9LV66 · AlphaFold DB Q9LV66
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