Research workbench
AlphaFold monomer V2.0 prediction for mio-dependent tyrosine 2,3-aminomutase (Q8GMG0)
Analyse AlphaFold monomer V2.0 prediction for mio-dependent tyrosine 2,3-aminomutase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8GMG0
- Type
- protein
- Length
- 539 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Mio-dependent tyrosine 2,3-aminomutase
- UniProt
- Q8GMG0
- Pockets
- 4 · best druggability 0.47
Structure
1 distinct chain · 56% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mio-dependent tyrosine 2,3-aminomutase | protein | 539 | 56% helix, 6% strand | Q8GMG0 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.47 | 0.78 | 33 | empty |
| 2 | 105 | 0.38 | 0.75 | 15 | empty |
| 3 | 73 | 0.34 | 0.76 | 17 | empty |
| 4 | 50 | 0.27 | 0.74 | 11 | empty |
Compared structures
- 2RJS · Sgtam bound to substrate mimic · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 3KDZ · X-ray crystal structure of a tyrosine aminomutase mutant construct with bound ligand · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 3KDY · X-ray crystal structure of tyrosine aminomutase mutant construct · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2OHY · X-ray crystal structure of tyrosine aminomutase from streptomyces globisporus · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 2RJR · Substrate mimic bound to sgtam · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2QVE · Crystal structure of sgtam bound to mechanism based inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2RJS · SgTAM bound to substrate mimic · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 3KDZ · X-ray crystal structure of a tyrosine aminomutase mutant construct with bound ligand · an experimental structure of the same protein · chain A against B, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GMG0
- Elsewhere: UniProt Q8GMG0 · AlphaFold DB Q8GMG0
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