Research workbench
AlphaFold monomer V2.0 prediction for cell surface cu-only superoxide dismutase 5 (Q5AD07)
Analyse AlphaFold monomer V2.0 prediction for cell surface cu-only superoxide dismutase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5AD07
- Type
- protein
- Length
- 228 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFb9617e3d1524b865062230b220D11ED58B56e42
- Molecule
- Cell surface cu-only superoxide dismutase 5
- UniProt
- Q5AD07
- Pockets
- 1 · best druggability 0.34
Structure
1 distinct chain · 8% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell surface cu-only superoxide dismutase 5 | protein | 228 | 8% helix, 24% strand | Q5AD07 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.34 | 0.77 | 22 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5KBK · Candida albicans superoxide dismutase 5 (SOD5), E110A mutant · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 5KBL · Candida albicans superoxide dismutase 5 (SOD5), E110Q mutant · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 5KBL · Candida Albicans Superoxide Dismutase 5 (SOD5), E110Q Mutant · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 4N3T · Candida albicans Superoxide Dismutase 5 (SOD5), Cu(I) · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 4N3T · Candida albicans superoxide dismutase 5 (SOD5), CU(I) · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 4N3U · Candida albicans Superoxide Dismutase 5 (SOD5), Cu(II) · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 4N3U · Candida albicans superoxide dismutase 5 (SOD5), CU(II) · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 5CU9 · Candida albicans superoxide dismutase 5 (SOD5), apo · an experimental structure of the same protein · chain A against A, TM-score 0.64
- 5CU9 · Candida albicans superoxide dismutase 5 (SOD5), apo · an experimental structure of the same protein · chain A against A, TM-score 0.64
- 5KBM · Candida Albicans Superoxide Dismutase 5 (SOD5), D113N Mutant · an experimental structure of the same protein · chain A against A, TM-score 0.62
- 5KBM · Candida albicans superoxide dismutase 5 (SOD5), D113N mutant · an experimental structure of the same protein · chain A against A, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5AD07
- Elsewhere: UniProt Q5AD07 · AlphaFold DB Q5AD07
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