MolNFT v1 · #115794 · protein

Candida albicans superoxide dismutase 5 (SOD5), apo

5CU9 · Cell surface cu-only superoxide dismutase 5: “Candida albicans superoxide dismutase 5 (SOD5), apo”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.35). MolNFT v1 #115794 on GenesisL1: 3D structure, binding sites…

PDB: 5CU9
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cell surface cu-only superoxide dismutase 5
EC: 1.15.1.1
UniProt: Q5AD07
Ligands: SO4
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cell surface cu-only superoxide dismutase 5 (EC 1.15.1.1)	protein	153	10% helix, 35% strand	Q5AD07

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.35	0.78	14	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5CU9 · Candida albicans superoxide dismutase 5 (SOD5), apo · the same entry in another collection · chain A against A, TM-score 1.00
Q5AD07 · AlphaFold monomer V2.0 prediction for cell surface cu-only superoxide dismutase 5 (Q5AD07) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5AD07
Elsewhere: RCSB PDB 5CU9 · PDBe 5CU9 · UniProt Q5AD07

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