AlphaFold monomer V2.0 prediction for splicing factor 3B subunit 6 (Q9Y3B4)

Structure

1 distinct chain · 36% helix, 20% strand (DSSP).

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 3LQV · Branch recognition by SF3B14 · an experimental structure of the same protein · chain A against B, TM-score 0.91
• 3LQV · Branch Recognition by SF3b14 · an experimental structure of the same protein · chain A against B, TM-score 0.91
• 2F9D · 2.5 ångström resolution structure of the spliceosomal protein P14 bound to region of… · an experimental structure of the same protein · chain A against A, TM-score 0.90
• 2F9D · 2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of… · an experimental structure of the same protein · chain A against A, TM-score 0.90
• 2F9J · 3.0 angstrom resolution structure of a Y22M mutant of the spliceosomal protein p14 bound… · an experimental structure of the same protein · chain A against A, TM-score 0.89
• 2F9J · 3.0 ångström resolution structure of a Y22M mutant of the spliceosomal protein P14 bound… · an experimental structure of the same protein · chain A against A, TM-score 0.89
• 7Q4O · Substrate-bound a-like U2 snrnp · an experimental structure of the same protein · chain A against F, TM-score 0.71
• 7Q4O · Substrate-bound A-like U2 snRNP · an experimental structure of the same protein · chain A against F, TM-score 0.71
• 8QO9 · Cryo-EM structure of a human spliceosomal B complex protomer · an experimental structure of the same protein · chain A against B6, TM-score 0.71
• 8QZS · Cryo-EM structure of the cross-exon B-like complex · an experimental structure of the same protein · chain A against B6, TM-score 0.70

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q9Y3B4
• Elsewhere: UniProt Q9Y3B4 · AlphaFold DB Q9Y3B4