Research workbench
AlphaFold monomer V2.0 prediction for sex comb on midleg-like protein 2 (Q9UQR0)
Analyse AlphaFold monomer V2.0 prediction for sex comb on midleg-like protein 2 (Q9UQR0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9UQR0
- Type
- protein
- Length
- 700 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8ed8ad559dA83256eAa95ABFDE527E15c9080462
- Molecule
- Sex comb on midleg-like protein 2
- UniProt
- Q9UQR0
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 18% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sex comb on midleg-like protein 2 | protein | 700 | 18% helix, 13% strand | Q9UQR0 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1181 | 0.72 | 0.76 | 111 | empty |
| 2 | 234 | 0.51 | 0.75 | 31 | empty |
| 3 | 206 | 0.47 | 0.74 | 24 | empty |
Compared structures
- 2VYT · The mbt repeats of human SCML2 bind to peptides containing mono methylated lysine. · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 2VYT · The MBT repeats of human SCML2 bind to peptides containing mono methylated lysine. · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 2BIV · Crystal structure of the wild-type MBT domains of Human SCML2 · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 2BIV · Crystal structure of the wild-type mbt domains of human SCML2 · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 4EDU · The mbt repeats of human SCML2 in a complex with histone H2A peptide · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 4EDU · The MBT repeats of human SCML2 in a complex with histone H2A peptide · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 1OI1 · Crystal structure of the mbt domains of human SCML2 · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 1OI1 · Crystal Structure of the MBT domains of Human SCML2 · an experimental structure of the same protein · chain A against A, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UQR0
- Elsewhere: UniProt Q9UQR0 · AlphaFold DB Q9UQR0
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