AlphaFold monomer V2.0 prediction for 40S ribosomal protein S11-a (P0CX47)

Structure

1 distinct chain · 7% helix, 34% strand (DSSP).

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 6EML · Cryo-EM structure of a late pre-40S ribosomal subunit from saccharomyces cerevisiae · an experimental structure of the same protein · chain A against X, TM-score 0.89
• 6EML · Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae · an experimental structure of the same protein · chain A against X, TM-score 0.89
• 5NDV · Crystal structure of Paromomycin bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against c1, TM-score 0.89
• 6Q8Y · Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease… · an experimental structure of the same protein · chain A against X, TM-score 0.89
• 7WTM · Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-E · an experimental structure of the same protein · chain A against SL, TM-score 0.88
• 6ZVI · MBF1-ribosome complex · an experimental structure of the same protein · chain A against t, TM-score 0.88
• 6ZVI · Mbf1-ribosome complex · an experimental structure of the same protein · chain A against t, TM-score 0.88
• 7WTQ · Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (without Rps2) · an experimental structure of the same protein · chain A against SL, TM-score 0.88
• 6Z6K · Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes · an experimental structure of the same protein · chain A against SL, TM-score 0.88
• 7WTR · Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3 · an experimental structure of the same protein · chain A against SL, TM-score 0.88
• 6Z6J · Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition · an experimental structure of the same protein · chain A against SL, TM-score 0.88
• 7WTP · Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (with Rps2) · an experimental structure of the same protein · chain A against SL, TM-score 0.88

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P0CX47
• Elsewhere: UniProt P0CX47 · AlphaFold DB P0CX47