UniProt P0CX47
40S ribosomal protein S11-A (P0CX47)
40S ribosomal protein S11-A (UniProt P0CX47): 112 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 52 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0CX47
- Protein
- 40S ribosomal protein S11-A
- Experimental structures
- 112
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 52 · 33 records with a druggable one
Structures
113 records of P0CX47 in the MolNFT archive: 112 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3J6X | S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II) | electron microscopy | 11 | — | — |
| 3J6Y | S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I) | electron microscopy | 11 | — | — |
| 3J77 | Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class… | electron microscopy | 11 | — | — |
| 3J78 | Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class… | electron microscopy | 11 | — | — |
| 4U3M | Crystal structure of Anisomycin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U3N | Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U3U | Crystal structure of Cycloheximide bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4N | Crystal structure of Edeine bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4O | Crystal structure of Geneticin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4Q | Crystal structure of Homoharringtonine bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4R | Crystal structure of Lactimidomycin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4U | Crystal structure of Lycorine bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4Y | Crystal structure of Pactamycin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U4Z | Crystal structure of Phyllanthoside bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U50 | Crystal structure of Verrucarin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U51 | Crystal structure of Narciclasine bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U52 | Crystal structure of Nagilactone C bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U53 | Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U55 | Crystal structure of Cryptopleurine bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U56 | Crystal structure of Blasticidin S bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4U6F | Crystal structure of T-2 toxin bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | — | — |
| 4V88 | The structure of the eukaryotic ribosome at 3.0 A resolution. | x-ray diffraction | AL, CL | — | — |
| 4V8Y | Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex | electron microscopy | AL | — | — |
| 4V8Z | Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex | electron microscopy | AL | — | — |
| 5DGV | Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA… | x-ray diffraction | C1, c1 | — | — |
| 5FCI | Structure of the vacant uL3 W255C mutant 80S yeast ribosome | x-ray diffraction | C1, c1 | OHX, MG | 1 (best 0.89) |
| 5JUO | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura… | electron microscopy | IB | — | 2 (best 0.87) |
| 5JUP | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura… | electron microscopy | IB | — | — |
| 5JUS | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura… | electron microscopy | IB | — | — |
| 5JUT | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura… | electron microscopy | IB | — | 1 (best 0.87) |
| 5JUU | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura… | electron microscopy | IB | — | 2 (best 0.88) |
| 5LL6 | Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation | electron microscopy | X | — | — |
| 5LL6 | Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation | electron microscopy | X | — | — |
| 5M1J | Nonstop ribosomal complex bound with Dom34 and Hbs1 | electron microscopy | L2 | MG | — |
| 5MC6 | Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae | electron microscopy | X | — | — |
| 5MEI | Crystal structure of Agelastatin A bound to the 80S ribosome | x-ray diffraction | M, c1 | OHX, MG | — |
| 5NDG | Crystal structure of geneticin (G418) bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | MG | — |
| 5NDW | Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome | x-ray diffraction | C1, c1 | MG | 2 (best 0.89) |
| 5TZS | Architecture of the yeast small subunit processome | electron microscopy | D | — | 1 (best 0.79) |
| 5TZS | Architecture of the yeast small subunit processome | electron microscopy | D | — | — |
| 5WLC | The complete structure of the small subunit processome | electron microscopy | LD | — | — |
| 5WYK | Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP) | electron microscopy | SM | — | — |
| 6EML | Cryo-EM structure of a late pre-40S ribosomal subunit from saccharomyces cerevisiae | electron microscopy | X | — | — |
| 6FAI | Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit | electron microscopy | L | MG | 1 (best 0.86) |
| 6FAI | Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit | electron microscopy | L | — | — |
| 6GQ1 | Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin) | electron microscopy | AB | — | — |
| 6GQB | Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin) | electron microscopy | AB | — | — |
| 6GQV | Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP) | electron microscopy | AB | — | — |
| 6HHQ | Crystal structure of compound C45 bound to the yeast 80S ribosome | x-ray diffraction | M, c1 | OHX, MG | — |
| 6I7O | The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways… | electron microscopy | X, Xb | — | — |
| 6LQP | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A) | electron microscopy | SM | — | — |
| 6LQQ | Cryo-EM structure of 90S small subunit preribosomes in transition states (State B) | electron microscopy | SM | — | — |
| 6LQR | Cryo-EM structure of 90S small subunit preribosomes in transition states (State C) | electron microscopy | SM | — | — |
| 6LQS | Cryo-EM structure of 90S small subunit preribosomes in transition states (State D) | electron microscopy | SM | — | — |
| 6LQT | Cryo-EM structure of 90S small subunit preribosomes in transition states (State E) | electron microscopy | SM | — | — |
| 6LQU | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1) | electron microscopy | SM | — | — |
| 6LQV | Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1) | electron microscopy | SM | — | — |
| 6Q8Y | Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex | electron microscopy | X | — | 2 (best 0.87) |
| 6RBD | State 1 of yeast TSR1-tap RPS20-deltaloop pre-40S particles | electron microscopy | L | — | — |
| 6RBE | State 2 of yeast TSR1-tap RPS20-deltaloop pre-40S particles | electron microscopy | L | — | — |
53 records more on the page itself.
Ligands
Experiment against prediction
- 5WLC chain LD against the predicted model P0CX47: TM-score 0.95, RMSD 1.17 Å
- 8BN3 chain C1 against the predicted model P0CX47: TM-score 0.95, RMSD 1.16 Å
- 6FAI chain L against the predicted model P0CX47: TM-score 0.95, RMSD 1.06 Å
- 6FAI chain L against the predicted model P0CX47: TM-score 0.95, RMSD 1.06 Å
- 6RBD chain L against the predicted model P0CX47: TM-score 0.95, RMSD 1.06 Å
- 8CIV chain o against the predicted model P0CX47: TM-score 0.95, RMSD 1.07 Å
- 8CDR chain o against the predicted model P0CX47: TM-score 0.95, RMSD 1.09 Å
- 8CEH chain o against the predicted model P0CX47: TM-score 0.95, RMSD 1.07 Å
- 7ZW0 chain sX against the predicted model P0CX47: TM-score 0.95, RMSD 1.10 Å
- 8CAS chain X against the predicted model P0CX47: TM-score 0.95, RMSD 1.12 Å
Elsewhere
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