Research workbench
AlphaFold monomer V2.0 prediction for RAS-related GTP-binding protein C (Q9HB90)
Analyse AlphaFold monomer V2.0 prediction for RAS-related GTP-binding protein C (Q9HB90) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HB90
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- RAS-related GTP-binding protein C
- UniProt
- Q9HB90
- Pockets
- 3 · best druggability 0.51
Structure
1 distinct chain · 36% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RAS-related GTP-binding protein C | protein | 399 | 36% helix, 17% strand | Q9HB90 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.51 | 0.80 | 22 | empty |
| 2 | 169 | 0.43 | 0.74 | 25 | empty |
| 3 | 56 | 0.32 | 0.77 | 18 | empty |
Compared structures
- 6ULG · Cryo-EM structure of the flcn-FNIP2-rag-ragulator complex · an experimental structure of the same protein · chain A against G, TM-score 0.76
- 6ULG · Cryo-EM structure of the FLCN-FNIP2-Rag-Ragulator complex · an experimental structure of the same protein · chain A against G, TM-score 0.76
- 6WJ3 · CryoEM structure of the SLC38A9-RagA-RagC-Ragulator complex in the post-GAP state · an experimental structure of the same protein · chain A against G, TM-score 0.75
- 6WJ3 · Cryoem structure of the SLC38A9-raga-ragc-ragulator complex in the post-gap state · an experimental structure of the same protein · chain A against G, TM-score 0.75
- 6WJ2 · Cryoem structure of the SLC38A9-raga-ragc-ragulator complex in the pre-gap state · an experimental structure of the same protein · chain A against G, TM-score 0.75
- 6WJ2 · CryoEM structure of the SLC38A9-RagA-RagC-Ragulator complex in the pre-GAP state · an experimental structure of the same protein · chain A against G, TM-score 0.75
- 8DHB · Active FLCN GAP complex · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 7T3B · GATOR1-rag-ragulator - gap complex · an experimental structure of the same protein · chain A against E, TM-score 0.74
- 7T3B · GATOR1-RAG-RAGULATOR - GAP Complex · an experimental structure of the same protein · chain A against E, TM-score 0.74
- 6NZD · Cryo-EM structure of the lysosomal folliculin complex (flcn-FNIP2- raga-ragc-ragulator) · an experimental structure of the same protein · chain A against G, TM-score 0.73
- 6NZD · Cryo-EM Structure of the Lysosomal Folliculin Complex (FLCN-FNIP2-RagA-RagC-Ragulator) · an experimental structure of the same protein · chain A against G, TM-score 0.73
- 7T3C · GATOR1-rag-ragulator - dual complex · an experimental structure of the same protein · chain A against E, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HB90
- Elsewhere: UniProt Q9HB90 · AlphaFold DB Q9HB90
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