Research workbench
AlphaFold monomer V2.0 prediction for heterogeneous nuclear ribonucleoprotein A1 (P09651)
Analyse AlphaFold monomer V2.0 prediction for heterogeneous nuclear ribonucleoprotein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P09651
- Type
- protein
- Length
- 372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF7e50Fe2e6fcA90573918459ED90298F35ceaE3D
- Molecule
- Heterogeneous nuclear ribonucleoprotein A1
- UniProt
- P09651
- Pockets
- 2 · best druggability 0.63
Structure
1 distinct chain · 16% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Heterogeneous nuclear ribonucleoprotein A1 | protein | 372 | 16% helix, 16% strand | P09651 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 412 | 0.63 | 0.78 | 49 | empty |
| 2 | 133 | 0.58 | 0.84 | 25 | empty |
Compared structures
- 1U1R · Crystal structure of UP1 complexed with D(TTAGGGTTAG(2PR) G); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1R · Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(2PR)G); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1P · Crystal structure of UP1 complexed with D(TTAGGGTTA 2PR gg); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1P · Crystal Structure of UP1 Complexed With d(TTAGGGTTA 2PR GG); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1N · Crystal structure of UP1 complexed with D(TTAGGGTTA (prn) gg); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1N · Crystal Structure of UP1 Complexed With d(TTAGGGTTA (PRN)GG); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1M · Crystal Structure of UP1 Complexed With d(TTAGGGTTA 7GU GG); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1M · Crystal structure of UP1 complexed with D(TTAGGGTTA 7GU gg); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1K · Crystal structure of UP1 complexed with D(TTAGGGTT 7DA ggg); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1K · Crystal Structure of UP1 Complexed With d(TTAGGGTT 7DA GGG); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1L · Crystal structure of UP1 complexed with D(TTAGGGTT prn ggg); a human telomeric repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1U1L · Crystal Structure of UP1 Complexed With d(TTAGGGTT PRN GGG); A Human Telomeric Repeat… · an experimental structure of the same protein · chain A against A, TM-score 0.49
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09651
- Elsewhere: UniProt P09651 · AlphaFold DB P09651
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