Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF38 (Q9H0F5)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF38 (Q9H0F5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9H0F5
- Type
- protein
- Length
- 515 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xAdBb5c32E453244bFe88dA9295e60cB3604b64E1
- Molecule
- E3 ubiquitin-protein ligase RNF38
- UniProt
- Q9H0F5
Structure
1 distinct chain · 6% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase RNF38 | protein | 515 | 6% helix, 3% strand | Q9H0F5 |
Compared structures
- 4V3K · RNF38-UbcH5B-UB complex · an experimental structure of the same protein · chain A against C, TM-score 0.14
- 4V3K · RNF38-UBCH5B-ub complex · an experimental structure of the same protein · chain A against C, TM-score 0.14
- 4V3L · RNF38-ub-UBCH5B-ub complex · an experimental structure of the same protein · chain A against C, TM-score 0.13
- 4V3L · RNF38-UB-UbcH5B-Ub complex · an experimental structure of the same protein · chain A against C, TM-score 0.13
- 7OJX · E2 UBE2K covalently linked to donor Ub, acceptor di-Ub, and RING E3 primed for K48-linked… · an experimental structure of the same protein · chain A against A, TM-score 0.13
- 7OJX · E2 UBE2K covalently linked to donor ub, acceptor di-ub, and ring E3 primed for K48-linked… · an experimental structure of the same protein · chain A against A, TM-score 0.13
- 1X4J · Solution structure of ring finger in ring finger protein 38 · an experimental structure of the same protein · chain A against A, TM-score 0.12
- 1X4J · Solution structure of RING finger in RING finger protein 38 · an experimental structure of the same protein · chain A against A, TM-score 0.12
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H0F5
- Elsewhere: UniProt Q9H0F5 · AlphaFold DB Q9H0F5
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