AlphaFold monomer V2.0 prediction for 60S ribosomal protein L10 (P41805)

Structure

1 distinct chain · 30% helix, 25% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 5MC6 · Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae · an experimental structure of the same protein · chain A against BD, TM-score 0.96
• 6TNU · Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs. · an experimental structure of the same protein · chain A against BD, TM-score 0.96
• 8CIV · Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2… · an experimental structure of the same protein · chain A against MM, TM-score 0.96
• 6T83 · Structure of yeast disome (di-ribosome) stalled on poly(A) tract. · an experimental structure of the same protein · chain A against Iy, TM-score 0.96
• 8CG8 · Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2… · an experimental structure of the same protein · chain A against MM, TM-score 0.95
• 7NRC · Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A… · an experimental structure of the same protein · chain A against LL, TM-score 0.95
• 5GAK · Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A · an experimental structure of the same protein · chain A against s, TM-score 0.95
• 7ZS5 · Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA · an experimental structure of the same protein · chain A against BK, TM-score 0.95
• 4U52 · Crystal structure of Nagilactone C bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against m0, TM-score 0.94
• 4U4Z · Crystal structure of Phyllanthoside bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against m0, TM-score 0.94
• 4U4R · Crystal structure of Lactimidomycin bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against m0, TM-score 0.94
• 4U3U · Crystal structure of Cycloheximide bound to the yeast 80S ribosome · an experimental structure of the same protein · chain A against m0, TM-score 0.94

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P41805
• Elsewhere: UniProt P41805 · AlphaFold DB P41805