Research workbench
AlphaFold monomer V2.0 prediction for particulate methane monooxygenase beta subunit (Q607G3)
Analyse AlphaFold monomer V2.0 prediction for particulate methane monooxygenase beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q607G3
- Type
- protein
- Length
- 247 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC96bf460fCE06DE673487c108d3C845a605dCf24
- Molecule
- Particulate methane monooxygenase beta subunit
- UniProt
- Q607G3
- Pockets
- 2 · best druggability 0.40
Structure
1 distinct chain · 70% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Particulate methane monooxygenase beta subunit | protein | 247 | 70% helix, 3% strand | Q607G3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 91 | 0.40 | 0.78 | 18 | empty |
| 2 | 99 | 0.38 | 0.75 | 14 | empty |
Compared structures
- 7S4K · Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 7S4K · CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 7S4H · CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against F, TM-score 0.97
- 7S4H · Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 8SQW · particulate methane monooxygenase crosslinked with 2,2,2-trifluoroethanol bound · an experimental structure of the same protein · chain A against B, TM-score 0.97
- 7S4I · CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against J, TM-score 0.97
- 8OYI · particulate methane monooxygenase with 2,2,2-trifluoroethanol bound · an experimental structure of the same protein · chain A against J, TM-score 0.97
- 7S4I · Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at… · an experimental structure of the same protein · chain A against B, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q607G3
- Elsewhere: UniProt Q607G3 · AlphaFold DB Q607G3
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