UniProt Q607G3
Particulate methane monooxygenase beta subunit (Q607G3)
Particulate methane monooxygenase beta subunit (UniProt Q607G3), EC 1.14.13.25, 1.14.18.3: 26 experimental structures and 1 predicted model on GenesisL1, 7 ligands bound, 303 pockets. Binding sites, druggability and experiment…
- UniProt
- Q607G3
- Protein
- Particulate methane monooxygenase beta subunit
- EC
- 1.14.13.25, 1.14.18.3
- Experimental structures
- 26
- Predicted models
- 1
- Ligands
- 7
- Pockets
- 303 · 18 records with a druggable one
Structures
27 records of Q607G3 in the MolNFT archive: 26 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1YEW | Crystal structure of particulate methane monooxygenase | x-ray diffraction | B, F, J | ZN | 17 (best 0.77) |
| 1YEW | Crystal structure of particulate methane monooxygenase | x-ray diffraction | B, F, J | ZN | 17 (best 0.77) |
| 3RGB | Crystal structure of particulate methane monooxygenase from Methylococcus capsulatus (Bath) | x-ray diffraction | B, J, F | ZN | 13 (best 0.77) |
| 3RGB | Crystal structure of particulate methane monooxygenase from methylococcus capsulatus (bath) | x-ray diffraction | B, J, F | — | — |
| 7EV9 | cryoEM structure of particulate methane monooxygenase associated with Cu(I) | electron microscopy | B, F, J | CU1 | 17 (best 0.73) |
| 7EV9 | Cryoem structure of particulate methane monooxygenase associated with CU(I) | electron microscopy | B, F, J | CU1 | — |
| 7S4H | CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.14… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | 15 (best 0.68) |
| 7S4H | Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at 2.14… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | — |
| 7S4I | CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.26… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | 16 (best 0.68) |
| 7S4I | Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at 2.26… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | — |
| 7S4J | CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.16… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | 17 (best 0.70) |
| 7S4J | Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at 2.16… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | — |
| 7S4K | CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.34… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | 17 (best 0.68) |
| 7S4K | Cryoem structure of methylococcus capsulatus (bath) pmmo in a native lipid nanodisc at 2.34… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | — |
| 7T4O | CryoEM structure of Methylococcus capsulatus (Bath) pMMO treated with potassium cyanide in a native… | electron microscopy | B, F, J | P1O, PLC, D10 | 20 (best 0.70) |
| 7T4O | Cryoem structure of methylococcus capsulatus (bath) pmmo treated with potassium cyanide in a native… | electron microscopy | B, F, J | P1O, PLC, D10 | — |
| 7T4P | CryoEM structure of Methylococcus capsulatus (Bath) pMMO treated with potassium cyanide and copper… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | 17 (best 0.71) |
| 7T4P | Cryoem structure of methylococcus capsulatus (bath) pmmo treated with potassium cyanide and copper… | electron microscopy | B, F, J | PLC, HXG, P1O, D10 | — |
| 7YZY | pMMO structure from native membranes by cryoET and STA | electron microscopy | B, F, J | — | 16 (best 0.84) |
| 7YZY | Pmmo structure from native membranes by cryoet and sta | electron microscopy | B, F, J | — | 16 (best 0.84) |
| 8OYI | particulate methane monooxygenase with 2,2,2-trifluoroethanol bound | electron microscopy | B, F, J | PLC, P1O, D10, HXG | 17 (best 0.70) |
| 8SQW | particulate methane monooxygenase crosslinked with 2,2,2-trifluoroethanol bound | electron microscopy | B, F, J | PLC, P1O, D10, HXG | 17 (best 0.67) |
| 8SR1 | particulate methane monooxygenase crosslinked with 4,4,4-trifluorobutanol bound | electron microscopy | B, F, J | PLC, P1O, D10, HXG, WIY | 15 (best 0.67) |
| 8SR2 | particulate methane monooxygenase incubated with 4,4,4-trifluorobutanol | electron microscopy | B, J, F | PLC, P1O, D10, HXG | 17 (best 0.70) |
| 8SR4 | particulate methane monooxygeanse treated with potassium cyanide and copper reloaded | electron microscopy | B, F, J | — | 18 (best 0.76) |
| 8SR5 | particulate methane monooxygenase potassium cyanide treated | electron microscopy | B, F, J | — | 19 (best 0.67) |
| Q607G3 | AlphaFold monomer V2.0 prediction for particulate methane monooxygenase beta subunit (Q607G3) | predicted | A | — | 2 (best 0.40) |
Ligands
- D10 · Decane · in 16 records
- P1O · 1,2-didecanoyl-sn-glycero-3-phosphocholine · in 16 records
- PLC · Diundecyl phosphatidyl choline · in 16 records
- HXG · 1,2-dihexanoyl-sn-glycero-3-phosphocholine · in 14 records
- ZN · Zinc ion · in 3 records
- CU1 · Copper (I) ion · in 2 records
- WIY · 4,4,4-trifluorobutan-1-ol · in 1 record
Experiment against prediction
- 7S4K chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.78 Å
- 7S4K chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.78 Å
- 7S4H chain F against the predicted model Q607G3: TM-score 0.99, RMSD 0.79 Å
- 7S4H chain J against the predicted model Q607G3: TM-score 0.99, RMSD 0.79 Å
- 7S4H chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.80 Å
- 7S4H chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.80 Å
- 8SQW chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.83 Å
- 7S4I chain J against the predicted model Q607G3: TM-score 0.99, RMSD 0.83 Å
- 8OYI chain J against the predicted model Q607G3: TM-score 0.99, RMSD 0.83 Å
- 8OYI chain B against the predicted model Q607G3: TM-score 0.99, RMSD 0.83 Å
Elsewhere
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