MolNFT v2 · #180024 · protein
cryoEM structure of particulate methane monooxygenase associated with Cu(I)
7EV9: “cryoEM structure of particulate methane monooxygenase associated with Cu(I)”. Electron microscopy at 2.6, 1 ligand (CU1). MolNFT v2 #180024 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EV9
- Type
- protein
- Length
- 2,142 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.6
- Source
- Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
- UniProt
- G1UBD1, Q607G3, Q603F1
- Ligands
- CU1
Structure
electron microscopy · resolution 2.6 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E, I | — | protein | 382 | — | G1UBD1 |
| B, F, J | — | protein | 220 | — | Q607G3 |
| C, G, K | — | protein | 112 | — | Q603F1 |
Ligands and binding sites
- CU1 · Copper (I) ion · metal · 24 copies · chains A, B, C, E, F, G, I, J, K
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EV9 · Cryoem structure of particulate methane monooxygenase associated with CU(I) · the same entry in another collection · chain K against K, TM-score 1.00
- Q607G3 · AlphaFold monomer V2.0 prediction for particulate methane monooxygenase beta subunit… · a predicted model of the same protein · chain B against A, TM-score 0.99
- G1UBD1 · AlphaFold monomer V2.0 prediction for particulate methane monooxygenase alpha subunit… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G1UBD1
- Every structure of UniProt Q607G3
- Every structure of UniProt Q603F1
- Elsewhere: RCSB PDB 7EV9 · PDBe 7EV9 · UniProt G1UBD1 · UniProt Q607G3 · UniProt Q603F1
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