Research workbench
AlphaFold monomer V2.0 prediction for origin recognition complex subunit 1 (O16810)
Analyse AlphaFold monomer V2.0 prediction for origin recognition complex subunit 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O16810
- Type
- protein
- Length
- 924 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Origin recognition complex subunit 1
- UniProt
- O16810
- Pockets
- 7 · best druggability 0.63
Structure
1 distinct chain · 28% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Origin recognition complex subunit 1 | protein | 924 | 28% helix, 13% strand | O16810 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 199 | 0.63 | 0.83 | 29 | empty |
| 2 | 529 | 0.59 | 0.73 | 47 | empty |
| 3 | 158 | 0.43 | 0.74 | 22 | empty |
| 4 | 87 | 0.35 | 0.75 | 19 | empty |
| 5 | 85 | 0.32 | 0.74 | 19 | empty |
Compared structures
- 7JGR · Structure of Drosophila ORC bound to DNA (84 bp) and Cdc6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JGR · Structure of drosophila orc bound to DNA (84 bp) and CDC6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK4 · Structure of drosophila orc bound to at-rich DNA and CDC6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK4 · Structure of Drosophila ORC bound to AT-rich DNA and Cdc6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JGS · Structure of Drosophila ORC bound to poly(dA/dT) DNA and Cdc6 (conformation 2) · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JGS · Structure of drosophila orc bound to POLY(DA/DT) DNA and CDC6 (conformation 2) · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK2 · Structure of Drosophila ORC bound to poly(dA/dT) DNA and Cdc6 (conformation 1) · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK2 · Structure of drosophila orc bound to POLY(DA/DT) DNA and CDC6 (conformation 1) · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK3 · Structure of Drosophila ORC bound to GC-rich DNA and Cdc6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK3 · Structure of drosophila orc bound to gc-rich DNA and CDC6 · an experimental structure of the same protein · chain A against A, TM-score 0.43
- 7JK5 · Structure of drosophila orc bound to DNA · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 7JK5 · Structure of Drosophila ORC bound to DNA · an experimental structure of the same protein · chain A against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O16810
- Elsewhere: UniProt O16810 · AlphaFold DB O16810
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