AlphaFold monomer V2.0 prediction for 60S ribosome subunit biogenesis protein NIP7 (Q08962)

Structure

1 distinct chain · 35% helix, 29% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8V87 · 60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map) · an experimental structure of the same protein · chain A against l, TM-score 0.96
• 7R7A · State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model · an experimental structure of the same protein · chain A against l, TM-score 0.95
• 7NAC · State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model · an experimental structure of the same protein · chain A against l, TM-score 0.95
• 7R6K · State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region · an experimental structure of the same protein · chain A against l, TM-score 0.95
• 7R7C · State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model · an experimental structure of the same protein · chain A against l, TM-score 0.95
• 8V84 · 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map) · an experimental structure of the same protein · chain A against l, TM-score 0.94
• 6ELZ · State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S… · an experimental structure of the same protein · chain A against l, TM-score 0.93
• 6EM5 · State D architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of… · an experimental structure of the same protein · chain A against l, TM-score 0.93
• 6EM5 · State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of… · an experimental structure of the same protein · chain A against l, TM-score 0.93
• 8V83 · 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map) · an experimental structure of the same protein · chain A against l, TM-score 0.93
• 7OHR · Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae · an experimental structure of the same protein · chain A against l, TM-score 0.92

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q08962
• Elsewhere: UniProt Q08962 · AlphaFold DB Q08962