Research workbench
AlphaFold monomer V2.0 prediction for myogenesis-regulating glycosidase (Q6NSJ0)
Analyse AlphaFold monomer V2.0 prediction for myogenesis-regulating glycosidase (Q6NSJ0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NSJ0
- Type
- protein
- Length
- 714 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf0Aa067888A3e900110FDD599F9Aa39D7DF7a484
- Molecule
- Myogenesis-regulating glycosidase
- UniProt
- Q6NSJ0
- Pockets
- 7 · best druggability 0.65
Structure
1 distinct chain · 26% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myogenesis-regulating glycosidase | protein | 714 | 26% helix, 25% strand | Q6NSJ0 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 148 | 0.65 | 0.87 | 23 | empty |
| 2 | 203 | 0.55 | 0.79 | 29 | empty |
| 3 | 123 | 0.41 | 0.76 | 27 | empty |
| 4 | 128 | 0.41 | 0.75 | 20 | empty |
| 5 | 97 | 0.37 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7QQG · Crystal structure of myorg bound to 1-deoxygalactonojirimycin · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 7QQG · Crystal structure of MYORG bound to 1-deoxygalactonojirimycin · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 7QQH · Crystal structure of myorg (D520N) in complex with gal-A1,4-glc · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 7QQH · Crystal structure of MYORG (D520N) in complex with Gal-a1,4-Glc · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 7QQF · Crystal structure of unliganded myorg · an experimental structure of the same protein · chain A against C, TM-score 0.86
- 7QQF · Crystal structure of unliganded MYORG · an experimental structure of the same protein · chain A against C, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NSJ0
- Elsewhere: UniProt Q6NSJ0 · AlphaFold DB Q6NSJ0
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