UniProt Q9XBQ3
Alpha-L-arabinofuranosidase (Q9XBQ3)
Alpha-L-arabinofuranosidase (UniProt Q9XBQ3), EC 3.2.1.55: 11 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 38 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q9XBQ3
- Protein
- Alpha-L-arabinofuranosidase
- EC
- 3.2.1.55
- Experimental structures
- 11
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 38 · 7 records with a druggable one
Structures
12 records of Q9XBQ3 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1PZ2 | Crystal structure of a transient covalent reaction intermediate of a family 51… | x-ray diffraction | A, B | AHR | 8 (best 0.70) |
| 1PZ2 | Crystal structure of a transient covalent reaction intermediate of a family 51… | x-ray diffraction | A, B | — | — |
| 1PZ3 | Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus… | x-ray diffraction | A, B | — | 6 (best 0.68) |
| 1PZ3 | Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from geobacillus… | x-ray diffraction | A, B | — | — |
| 1QW8 | Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with Ara-alpha(1,3)-Xyl | x-ray diffraction | A, B | XYP, AHR | 6 (best 0.69) |
| 1QW8 | Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with ara-ALPHA(1,3)-xyl | x-ray diffraction | A, B | — | — |
| 1QW9 | Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with 4-nitrophenyl-Ara | x-ray diffraction | A, B | KHP | 6 (best 0.70) |
| 1QW9 | Crystal structure of a family 51 alpha-L-arabinofuranosidase in complex with 4-nitrophenyl-ara | x-ray diffraction | A, B | — | — |
| 6SXU | GH51 a-l-arabinofuranosidase soaked with cyclic sulfate inhibitor | x-ray diffraction | AAA, BBB | LX5 | 4 (best 0.70) |
| 6SXV | GH51 a-l-arabinofuranosidase soaked with aziridine inhibitor | x-ray diffraction | A, B | LXE, ETE | 6 (best 0.61) |
| 6SXV | GH51 a-L-arabinofuranosidase soaked with aziridine inhibitor | x-ray diffraction | A, B | LXE, ETE | — |
| Q9XBQ3 | AlphaFold monomer V2.0 prediction for intracellular exo- alpha-(1->5)-L-arabinofuranosidase (Q9XBQ3) | predicted | A | — | 2 (best 0.54) |
Ligands
- AHR · alpha-L-arabinofuranose · in 2 records
- ETE · 2-{2-[2-2-(methoxy-ethoxy)-ethoxy]-ethoxy}-ethanol · in 2 records
- LXE · [(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]azanium · in 2 records
- KHP · 4-nitrophenyl alpha-L-arabinofuranoside · in 1 record
- LX5 · [(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl] hydrogen sulfate · in 1 record
- XYP · beta-D-xylopyranose · in 1 record
Experiment against prediction
- 1PZ3 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.38 Å
- 1PZ3 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.38 Å
- 1QW8 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.38 Å
- 1QW8 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.38 Å
- 1PZ2 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.39 Å
- 1PZ2 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.39 Å
- 1QW9 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.40 Å
- 1QW9 chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.40 Å
- 6SXV chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.42 Å
- 6SXV chain A against the predicted model Q9XBQ3: TM-score 1.00, RMSD 0.42 Å
Elsewhere
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