UniProt Q43088
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (Q43088)
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (UniProt Q43088), EC 2.1.1.127: 14 experimental structures and 1 predicted model on GenesisL1, 7 ligands bound, 199 pockets. Binding sites…
- UniProt
- Q43088
- Protein
- Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit…
- EC
- 2.1.1.127
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 7
- Pockets
- 199 · 15 records with a druggable one
Structures
15 records of Q43088 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1MLV | Structure and Catalytic Mechanism of a SET Domain Protein Methyltransferase | x-ray diffraction | A, B, C | SAH | 10 (best 0.82) |
| 1MLV | Structure and catalytic mechanism of a set domain protein methyltransferase | x-ray diffraction | A, B, C | SAH | 10 (best 0.82) |
| 1OZV | Crystal structure of the SET domain of LSMT bound to Lysine and AdoHcy | x-ray diffraction | A, B, C | LYS, SAH | 14 (best 0.82) |
| 1OZV | Crystal structure of the set domain of lsmt bound to lysine and adohcy | x-ray diffraction | A, B, C | LYS, SAH | 14 (best 0.82) |
| 1P0Y | Crystal structure of the SET domain of LSMT bound to MeLysine and AdoHcy | x-ray diffraction | A, B, C | SAH, MLZ | 14 (best 0.81) |
| 1P0Y | Crystal structure of the set domain of lsmt bound to melysine and adohcy | x-ray diffraction | A, B, C | SAH, MLZ | 14 (best 0.81) |
| 2H21 | Structure of Rubisco LSMT bound to AdoMet | x-ray diffraction | A, B, C | SAM | 13 (best 0.80) |
| 2H21 | Structure of rubisco lsmt bound to adomet | x-ray diffraction | A, B, C | SAM | 13 (best 0.80) |
| 2H23 | Structure of Rubisco LSMT bound to Trimethyllysine and AdoHcy | x-ray diffraction | A, B, C | SAH, M3L | 14 (best 0.80) |
| 2H23 | Structure of rubisco lsmt bound to trimethyllysine and adohcy | x-ray diffraction | A, B, C | SAH, M3L | 14 (best 0.80) |
| 2H2E | Structure of Rubisco LSMT bound to AzaAdoMet and Lysine | x-ray diffraction | A, B, C | SA8, LYS | 18 (best 0.79) |
| 2H2E | Structure of rubisco lsmt bound to azaadomet and lysine | x-ray diffraction | A, B, C | SA8, LYS | 18 (best 0.79) |
| 2H2J | Structure of Rubisco LSMT bound to Sinefungin and Monomethyllysine | x-ray diffraction | A, B, C | SFG, MLZ | 15 (best 0.80) |
| 2H2J | Structure of rubisco lsmt bound to sinefungin and monomethyllysine | x-ray diffraction | A, B, C | SFG, MLZ | 15 (best 0.80) |
| Q43088 | AlphaFold monomer V2.0 prediction for ribulose-1,5 bisphosphate CARBOXYLASE/OXYGENASE large subunit… | predicted | A | — | 3 (best 0.76) |
Ligands
Experiment against prediction
- 1MLV chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.66 Å
- 1MLV chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.66 Å
- 2H23 chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.67 Å
- 2H23 chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.67 Å
- 2H2J chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.68 Å
- 2H2J chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.68 Å
- 2H21 chain A against the predicted model Q43088: TM-score 0.99, RMSD 0.66 Å
- 2H21 chain A against the predicted model Q43088: TM-score 0.99, RMSD 0.66 Å
- 2H2E chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.69 Å
- 2H2E chain C against the predicted model Q43088: TM-score 0.99, RMSD 0.69 Å
Elsewhere
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