UniProt Q3J1A3
Light-harvesting protein B-875 beta chain (Q3J1A3)
Light-harvesting protein B-875 beta chain (UniProt Q3J1A3): 11 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 94 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q3J1A3
- Protein
- Light-harvesting protein B-875 beta chain
- Experimental structures
- 11
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 94 · 7 records with a druggable one
Structures
12 records of Q3J1A3 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4V9G | RC-LH1-PufX dimer complex from Rhodobacter sphaeroides | x-ray diffraction | AS, A9, AO, AQ, A6, AU, AW, AY, A4, A8, AE, AG, AI, AK, BS, B9, BO, BQ, B6, BU, BW, BY, B4, B8, BE, BG, BI, BK | BCL | 9 (best 0.87) |
| 7PIL | Cryo-EM structure of the Rhodobacter sphaeroides RC-LH1-PufXY monomer complex at 2.5 A | electron microscopy | BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN | BCL, SPO | — |
| 7VA9 | Rba sphaeroides PufY-KO RC-LH1 dimer type-1 | electron microscopy | B, E, G, J, N, P, R, T, V, X, Z, 2, 8, 0, b, e, g, j, n, p, r, t, v, x, z, 4, aa, ab | BCL, SPO, PC1 | 10 (best 0.85) |
| 7VB9 | Rba sphaeroides PufY-KO RC-LH1 dimer type-2 | electron microscopy | B, E, G, J, N, 8, 0, b, e, g, j, n, p, r, t, v, x, z, 4, aa, ab | BCL, SPO, PC1 | 10 (best 0.84) |
| 7VNM | Rba sphaeroides PufY-KO RC-LH1 monomer | electron microscopy | B, E, G, J, N, P, R, T, V, C, 8, 0, 2 | BCL, SPO | 16 (best 0.82) |
| 7VNM | Rba sphaeroides pufy-ko rc-LH1 monomer | electron microscopy | B, E, G, J, N, P, R, T, V, C, 8, 0, 2 | BCL, SPO | — |
| 7VNY | Rba sphaeroides WT RC-LH1 monomer | electron microscopy | B, E, G, J, N, P, R, T, V, C, Z, 2, 8, 0 | BCL, SPO | 15 (best 0.84) |
| 7VNY | Rba sphaeroides wt rc-LH1 monomer | electron microscopy | B, E, G, J, N, P, R, T, V, C, Z, 2, 8, 0 | BCL, SPO | — |
| 7VOR | The structure of dimeric photosynthetic RC-LH1 supercomplex in Class-1 | electron microscopy | B, E, G, J, N, P, R, T, V, C, Z, 2, 8, 0, b, e, g, j, n, p, r, t, v, c, z, 4, b8, b0 | BCL, SPO | 16 (best 0.86) |
| 7VOT | The structure of dimeric photosynthetic RC-LH1 supercomplex in Class-2 | electron microscopy | B, E, G, J, N, P, R, T, V, C, Z, 2, 8, 0, b, e, g, j, n, p, r, t, v, c, z, 4, b8, b0 | BCL, SPO | 18 (best 0.85) |
| 7VOY | Rba sphaeroides pufx-ko rc-LH1 | electron microscopy | B, E, G, J, N, P, R, T, V, X, Z, 2, 8, 0, t, 5, 3 | BCL | — |
| Q3J1A3 | AlphaFold monomer V2.0 prediction for light-harvesting protein B-875 beta chain (Q3J1A3) | predicted | A | — | — |
Ligands
Experiment against prediction
- 7VOR chain 4 against the predicted model Q3J1A3: TM-score 0.92, RMSD 0.55 Å
- 7VOR chain 2 against the predicted model Q3J1A3: TM-score 0.92, RMSD 0.55 Å
- 7VNY chain 2 against the predicted model Q3J1A3: TM-score 0.89, RMSD 0.80 Å
- 7VNY chain 2 against the predicted model Q3J1A3: TM-score 0.89, RMSD 0.80 Å
- 7VB9 chain 4 against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.66 Å
- 7VB9 chain n against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.69 Å
- 7VB9 chain v against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.69 Å
- 7VOT chain t against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.83 Å
- 7VOT chain T against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.83 Å
- 7VB9 chain N against the predicted model Q3J1A3: TM-score 0.88, RMSD 0.78 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.