UniProt Q04491
Protein transport protein SEC13 (Q04491)
Protein transport protein SEC13 (UniProt Q04491): 28 experimental structures and 1 predicted model on GenesisL1, 2 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q04491
- Protein
- Protein transport protein SEC13
- Experimental structures
- 28
- Predicted models
- 1
- Pockets
- 2 · 1 record with a druggable one
Structures
29 records of Q04491 in the MolNFT archive: 28 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2PM6 | Crystal Structure of yeast Sec13/31 edge element of the COPII vesicular coat, native version | x-ray diffraction | B, D | — | — |
| 2PM6 | Crystal structure of yeast SEC13/31 edge element of the copii vesicular coat, native version | x-ray diffraction | B, D | — | — |
| 2PM7 | Crystal structure of yeast Sec13/31 edge element of the COPII vesicular coat, selenomethionine… | x-ray diffraction | B, D | — | — |
| 2PM7 | Crystal structure of yeast SEC13/31 edge element of the copii vesicular coat, selenomethionine… | x-ray diffraction | B, D | — | — |
| 2PM9 | Crystal structure of yeast Sec13/31 vertex element of the COPII vesicular coat | x-ray diffraction | B | — | — |
| 2PM9 | Crystal structure of yeast SEC13/31 vertex element of the copii vesicular coat | x-ray diffraction | B | — | — |
| 3IKO | Crystal structure of the heterotrimeric Sec13-Nup145C-Nup84 nucleoporin complex | x-ray diffraction | A, D, G | — | — |
| 3IKO | Crystal structure of the heterotrimeric SEC13-NUP145C-NUP84 nucleoporin complex | x-ray diffraction | A, D, G | — | — |
| 3JRO | NUP84-NUP145C-SEC13 edge element of the NPC lattice | x-ray diffraction | A | — | — |
| 3JRO | NUP84-NUP145C-SEC13 edge element of the npc lattice | x-ray diffraction | A | — | — |
| 3JRP | SEC13 with NUP145C (AA109-179) insertion blade | x-ray diffraction | A | — | — |
| 3JRP | SEC13 with NUP145C (AA109-179) insertion blade | x-ray diffraction | A | — | — |
| 3MZK | Sec13/Sec16 complex, S.cerevisiae | x-ray diffraction | A, D | — | — |
| 3MZK | SEC13/SEC16 complex, S.CEREVISIAE | x-ray diffraction | A, D | — | — |
| 3MZL | Sec13/Sec31 edge element, loop deletion mutant | x-ray diffraction | A, C, E, G | — | — |
| 3MZL | SEC13/SEC31 edge element, loop deletion mutant | x-ray diffraction | A, C, E, G | — | — |
| 4BZJ | The structure of the COPII coat assembled on membranes | electron microscopy | B, F | — | — |
| 4BZJ | The structure of the copii coat assembled on membranes | electron microscopy | B, F | — | — |
| 4BZK | The structure of the COPII coat assembled on membranes | electron microscopy | B, F | — | — |
| 4BZK | The structure of the copii coat assembled on membranes | electron microscopy | B, F | — | — |
| 4XMM | Structure of the yeast coat nucleoporin complex, space group C2 | x-ray diffraction | A | — | — |
| 4XMM | Structure of the yeast coat nucleoporin complex, space group C2 | x-ray diffraction | A | — | — |
| 4XMN | Structure of the yeast coat nucleoporin complex, space group P212121 | x-ray diffraction | A | — | — |
| 4XMN | Structure of the yeast coat nucleoporin complex, space group P212121 | x-ray diffraction | A | — | — |
| 6ZG5 | Copii on membranes, outer coat right-handed rod, CLASS1 | electron microscopy | B, F | — | — |
| 6ZG6 | Copii on membranes, outer coat vertex | electron microscopy | B, D, F, H | — | — |
| 6ZL0 | Copii on membranes, outer coat left-handed rod | electron microscopy | B, D | — | — |
| 7N84 | Double nuclear outer ring from the isolated yeast npc | electron microscopy | d, o | — | — |
| Q04491 | AlphaFold monomer V2.0 prediction for protein transport protein SEC13 (Q04491) | predicted | A | — | 2 (best 0.73) |
Experiment against prediction
- 3MZL chain A against the predicted model Q04491: TM-score 0.99, RMSD 0.48 Å
- 3MZL chain A against the predicted model Q04491: TM-score 0.99, RMSD 0.48 Å
- 2PM6 chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 2PM6 chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 6ZG6 chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 4BZJ chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 4BZJ chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 4BZK chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 4BZK chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
- 6ZL0 chain B against the predicted model Q04491: TM-score 0.99, RMSD 0.62 Å
Elsewhere
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