UniProt P62314
Small nuclear ribonucleoprotein Sm D1 (P62314)
Small nuclear ribonucleoprotein Sm D1 (UniProt P62314): 57 experimental structures on GenesisL1, 37 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- P62314
- Protein
- Small nuclear ribonucleoprotein Sm D1
- Experimental structures
- 57
- Predicted models
- 0
- Pockets
- 37 · 16 records with a druggable one
Structures
57 records of P62314 in the MolNFT archive: 57 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1B34 | Crystal structure of the D1D2 sub-complex from the human snrnp core domain | x-ray diffraction | A | — | — |
| 1B34 | Crystal structure of the D1D2 sub-complex from the human snrnp core domain | x-ray diffraction | A | — | — |
| 3CW1 | Crystal Structure of Human Spliceosomal U1 snRNP | x-ray diffraction | B, M, N, O | — | — |
| 3CW1 | Crystal structure of human spliceosomal U1 snrnp | x-ray diffraction | B, M, N, O | — | — |
| 3JCR | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | electron microscopy | P, p | — | — |
| 3JCR | 3D structure determination of the HUMAN*U4/U6.U5* tri-snrnp complex | electron microscopy | P, p | — | — |
| 3PGW | Crystal structure of human U1 snRNP | x-ray diffraction | X, U | — | — |
| 3PGW | Crystal structure of human U1 snrnp | x-ray diffraction | X, U | — | — |
| 4PJO | Minimal U1 snRNP | x-ray diffraction | C, c, Q, q | — | — |
| 4PJO | Minimal U1 snrnp | x-ray diffraction | C, c, Q, q | — | — |
| 4V98 | The 8S snRNP Assembly Intermediate | x-ray diffraction | AI, AA, AQ, AY, Ag, Ao, Aw, BA, BI, BQ, BY, Bg, Bo, Bw, CA, CI, CQ, CY, Cg, Co | — | — |
| 5MQF | Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) | electron microscopy | g, n | — | — |
| 5O9Z | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | electron microscopy | g, n, Z | — | 2 (best 0.82) |
| 5O9Z | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | electron microscopy | g, n, Z | — | — |
| 5XJC | Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom | electron microscopy | c, j | — | — |
| 5XJL | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2 in complex with SMD1/D2/F/E/G from… | x-ray diffraction | A | — | — |
| 5XJQ | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2 in complex with SMD1(1-82)/D2/F/E/G… | x-ray diffraction | A | — | — |
| 5XJR | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2DN39 in complex with… | x-ray diffraction | A | — | — |
| 5XJS | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2DN39 in complex with SMD1(1-82)/D2/F/E… | x-ray diffraction | A | — | — |
| 5XJT | Crystal Structure of the Gemin2-binding domain of SMN, Gemin2 in Complex with… | x-ray diffraction | A | — | 4 (best 0.57) |
| 5XJT | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2 in complex with… | x-ray diffraction | A | — | — |
| 5XJU | Crystal structure of the GEMIN2-binding domain of smn, GEMIN2DN39 in complex with… | x-ray diffraction | A | — | — |
| 5Z58 | Cryo-EM structure of a human activated spliceosome (early bact) at 4.9 ångström. | electron microscopy | c, j | — | — |
| 6AH0 | The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex) | electron microscopy | g, j, V | — | — |
| 6AH0 | The cryo-EM structure of the precusor of human pre-catalytic spliceosome (pre-B complex) | electron microscopy | g, j, V | — | — |
| 6FF7 | Human bact spliceosome core structure | electron microscopy | g, n | — | — |
| 6ICZ | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 ångström | electron microscopy | j, c | — | — |
| 6ID0 | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9… | electron microscopy | c, j | — | — |
| 6ID0 | Cryo-EM structure of a human intron lariat spliceosome prior to PRP43 loaded (ILS1 complex) at 2.9… | electron microscopy | c, j | — | — |
| 6ID1 | Cryo-EM structure of a human intron lariat spliceosome after PRP43 loaded (ILS2 complex) at 2.9… | electron microscopy | c, j | — | — |
| 6QW6 | Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution. | electron microscopy | 41, 51 | — | 2 (best 0.78) |
| 6QX9 | Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). | electron microscopy | 41, 11, 51, 21 | — | 2 (best 0.86) |
| 6Y53 | human 17S U2 snRNP low resolution part | electron microscopy | n | — | 3 (best 0.72) |
| 6Y53 | Human 17S U2 snrnp low resolution part | electron microscopy | n | — | — |
| 6Y5Q | Human 17S U2 snrnp | electron microscopy | n | — | — |
| 7A5P | Human C Complex Spliceosome - Medium-resolution PERIPHERY | electron microscopy | c, n | — | — |
| 7A5P | Human C complex spliceosome - medium-resolution periphery | electron microscopy | c, n | — | — |
| 7ABI | Human pre-bact-2 spliceosome | electron microscopy | n, g | — | — |
| 7B0Y | Structure of a transcribing RNA polymerase II-U1 snrnp complex | electron microscopy | k | — | — |
| 7DVQ | Cryo-EM structure of the activated human minor spliceosome (minor bact complex) | electron microscopy | c, j | — | — |
| 7EVO | The cryo-EM structure of the human 17S U2 snRNP | electron microscopy | g | — | — |
| 7EVO | The cryo-EM structure of the human 17S U2 snrnp | electron microscopy | g | — | — |
| 7VPX | The cryo-EM structure of the human pre-A complex | electron microscopy | g, h | — | 4 (best 0.85) |
| 7W59 | The cryo-EM structure of human pre-C*-I complex | electron microscopy | c, j | — | — |
| 7W5A | The cryo-EM structure of human pre-C*-II complex | electron microscopy | c, j | — | — |
| 7W5A | The cryo-EM structure of human pre-C*-II complex | electron microscopy | c, j | — | — |
| 8C6J | Human spliceosomal PM5 C* complex | electron microscopy | c, l | — | 1 (best 0.86) |
| 8H6E | Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. | electron microscopy | 5b, 4b, 2b | — | 1 (best 0.80) |
| 8HK1 | The cryo-EM structure of human pre-17S U2 snRNP | electron microscopy | g | — | 1 (best 0.75) |
| 8I0U | The cryo-EM structure of human Bact-IV complex | electron microscopy | b, n | — | 1 (best 0.80) |
| 8Q7V | Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1) | electron microscopy | a | — | 4 (best 0.83) |
| 8Q7X | Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4) | electron microscopy | a | — | 2 (best 0.86) |
| 8Q91 | Structure of the human 20S U5 snRNP core | electron microscopy | i | — | 3 (best 0.79) |
| 8R09 | Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex | electron microscopy | 21, 41, 51 | — | 2 (best 0.86) |
| 8R0B | Cryo-EM structure of the cross-exon pre-B+ATP complex | electron microscopy | 21, 41, 51 | — | 2 (best 0.86) |
| 8Y6O | Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP… | electron microscopy | b, i, p | — | 3 (best 0.80) |
| P62314 | AlphaFold monomer V2.0 prediction for small nuclear ribonucleoprotein sm D1 (P62314) | — | — | — |
Elsewhere
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