UniProt P42592
Glucosidase YgjK (P42592)
Glucosidase YgjK (UniProt P42592), EC 3.2.1.-: 20 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 37 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P42592
- Protein
- Glucosidase YgjK
- EC
- 3.2.1.-
- Experimental structures
- 20
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 37 · 4 records with a druggable one
Structures
21 records of P42592 in the MolNFT archive: 20 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3D3I | Crystal structural of Escherichia coli K12 YgjK, a glucosidase belonging to glycoside hydrolase… | x-ray diffraction | A, B | — | — |
| 3D3I | Crystal structural of escherichia COLI K12 ygjk, a glucosidase belonging to glycoside hydrolase… | x-ray diffraction | A, B | — | — |
| 3W7S | Escherichia coli K12 YgjK complexed with glucose | x-ray diffraction | A, B | — | — |
| 3W7S | Escherichia COLI K12 ygjk complexed with glucose | x-ray diffraction | A, B | — | — |
| 3W7T | Escherichia coli K12 YgjK complexed with mannose | x-ray diffraction | A, B | — | — |
| 3W7T | Escherichia COLI K12 ygjk complexed with mannose | x-ray diffraction | A, B | — | — |
| 3W7U | Escherichia coli K12 YgjK complexed with galactose | x-ray diffraction | A, B | — | — |
| 3W7U | Escherichia COLI K12 ygjk complexed with galactose | x-ray diffraction | A, B | — | — |
| 3W7W | Crystal structure of E. coli YgjK E727A complexed with… | x-ray diffraction | A, B | — | — |
| 3W7W | Crystal structure of E. COLI ygjk E727A complexed with 2-O-alpha-D… | x-ray diffraction | A, B | — | — |
| 3W7X | Crystal structure of E. coli YgjK D324N complexed with melibiose | x-ray diffraction | A, B | — | — |
| 3W7X | Crystal structure of E. COLI ygjk D324N complexed with melibiose | x-ray diffraction | A, B | — | — |
| 5CA3 | Crystal structure of the glycosynthase mutant D324N of Escherichia coli GH63 glycosidase in complex… | x-ray diffraction | A, B | GLC, GAL, CA, MG, BGC | 14 (best 0.86) |
| 5CA3 | Crystal structure of the glycosynthase mutant D324N of escherichia COLI GH63 glycosidase in complex… | x-ray diffraction | A, B | — | — |
| 5GW7 | Crystal structure of the glycosynthase mutant E727A of Escherichia coli GH63 glycosidase in complex… | x-ray diffraction | A, B | GLC, GAL, CA, MG, BGC | 11 (best 0.83) |
| 5GW7 | Crystal structure of the glycosynthase mutant E727A of escherichia COLI GH63 glycosidase in complex… | x-ray diffraction | A, B | — | — |
| 6XUX | Crystal structure of Megabody Mb-Nb207-cYgjK_NO | x-ray diffraction | A | CA | 5 (best 0.72) |
| 6XUX | Crystal structure of megabody mb-NB207-CYGJK_NO | x-ray diffraction | A | CA | — |
| 7PQQ | Structure of thermostabilised human NTCP in complex with Megabody 91 | electron microscopy | B | — | 1 (best 0.43) |
| 7PQQ | Structure of thermostabilised human ntcp in complex with megabody 91 | electron microscopy | B | — | — |
| P42592 | AlphaFold monomer V2.0 prediction for glucosidase ygjk (P42592) | predicted | A | — | 6 (best 0.59) |
Ligands
Experiment against prediction
- 3W7W chain B against the predicted model P42592: TM-score 0.99, RMSD 1.17 Å
- 3W7W chain B against the predicted model P42592: TM-score 0.99, RMSD 1.17 Å
- 3D3I chain A against the predicted model P42592: TM-score 0.99, RMSD 1.05 Å
- 3D3I chain A against the predicted model P42592: TM-score 0.99, RMSD 1.05 Å
- 3W7S chain A against the predicted model P42592: TM-score 0.99, RMSD 1.03 Å
- 3W7S chain A against the predicted model P42592: TM-score 0.99, RMSD 1.03 Å
- 5CA3 chain B against the predicted model P42592: TM-score 0.99, RMSD 1.19 Å
- 5CA3 chain B against the predicted model P42592: TM-score 0.99, RMSD 1.19 Å
- 3W7T chain A against the predicted model P42592: TM-score 0.99, RMSD 1.08 Å
- 3W7T chain A against the predicted model P42592: TM-score 0.99, RMSD 1.08 Å
Elsewhere
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