UniProt P15319
Chaperone protein PapD (P15319)
Chaperone protein PapD (UniProt P15319): 31 experimental structures and 1 predicted model on GenesisL1, 18 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P15319
- Protein
- Chaperone protein PapD
- Experimental structures
- 31
- Predicted models
- 1
- Pockets
- 18 · 3 records with a druggable one
Structures
32 records of P15319 in the MolNFT archive: 31 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1N0L | Crystal structure of the PapD chaperone (C-terminally 6x histidine-tagged) bound to the PapE pilus… | x-ray diffraction | A, C | — | — |
| 1N0L | Crystal structure of the papd chaperone (C-terminally 6X histidine-tagged) bound to the pape pilus… | x-ray diffraction | A, C | — | — |
| 1PDK | Papd-papk chaperone-pilus subunit complex from E.COLI P pilus | x-ray diffraction | A | — | — |
| 1PDK | Papd-papk chaperone-pilus subunit complex from E.COLI P pilus | x-ray diffraction | A | — | — |
| 1QPP | Crystal structures of self capping papd chaperone homodimers | x-ray diffraction | A, B | — | — |
| 1QPP | Crystal structures of self capping papd chaperone homodimers | x-ray diffraction | A, B | — | — |
| 1QPX | Crystal structures of self-capping papd chaperone homodimers | x-ray diffraction | A, B | — | — |
| 1QPX | Crystal structures of self-capping papd chaperone homodimers | x-ray diffraction | A, B | — | — |
| 2J2Z | X-Ray Structure of the Chaperone PapD in complex with the Pilus terminator subunit PapH at 2.3… | x-ray diffraction | A | — | — |
| 2J2Z | X-ray structure of the chaperone papd in complex with the pilus terminator subunit paph at 2.3… | x-ray diffraction | A | — | — |
| 2J7L | E. coli P Pilus chaperone PapD in complex with a pilus biogenesis inhibitor, pilicide 2c | x-ray diffraction | A | — | — |
| 2J7L | E.COLI P pilus chaperone papd in complex with a pilus biogenesis inhibitor, pilicide 2C | x-ray diffraction | A | — | — |
| 2WMP | Structure of the E. coli chaperone PapD in complex with the pilin domain of the PapGII adhesin | x-ray diffraction | A | — | — |
| 2WMP | Structure of the E. COLI chaperone papd in complex with the pilin domain of the papgii adhesin | x-ray diffraction | A | — | — |
| 2XG4 | E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c | x-ray diffraction | A | — | — |
| 2XG4 | E. COLI P pilus chaperone-subunit complex papd-paph bound to pilus biogenesis inhibitor, pilicide 2C | x-ray diffraction | A | — | — |
| 2XG5 | E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 5d | x-ray diffraction | A | — | — |
| 2XG5 | E. COLI P pilus chaperone-subunit complex papd-paph bound to pilus biogenesis inhibitor, pilicide 5D | x-ray diffraction | A | — | — |
| 3DPA | Crystal structure of chaperone protein papd reveals an immunoglobulin fold | x-ray diffraction | A | — | — |
| 3DPA | Crystal structure of chaperone protein papd reveals an immunoglobulin fold | x-ray diffraction | A | — | — |
| 3ME0 | Structure of the E. coli chaperone PAPD in complex with the pilin domain of the PapGII adhesin | x-ray diffraction | A | — | — |
| 3ME0 | Structure of the E. COLI chaperone papd in complex with the pilin domain of the papgii adhesin | x-ray diffraction | A | — | — |
| 5K93 | PapD wild-type chaperone | x-ray diffraction | A, B | — | 4 (best 0.78) |
| 5K93 | Papd wild-type chaperone | x-ray diffraction | A, B | — | — |
| 6CD2 | Crystal structure of the PapC usher bound to the chaperone-adhesin PapD-PapG | x-ray diffraction | A | — | — |
| 6CD2 | Crystal structure of the papc usher bound to the chaperone-adhesin papd-papg | x-ray diffraction | A | — | — |
| 7LHG | Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the first… | electron microscopy | D | — | 9 (best 0.68) |
| 7LHG | Cryo-EM structure of E. COLI P pilus tip assembly intermediate papc- papd-papk-papg in the first… | electron microscopy | D | — | — |
| 7LHH | Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the second… | electron microscopy | D | — | 4 (best 0.90) |
| 7LHH | Cryo-EM structure of E. COLI P pilus tip assembly intermediate papc- papd-papk-papg in the second… | electron microscopy | D | — | — |
| 7LHI | Cryo-EM structure of E. COLI P pilus tip assembly intermediate papc- papd-papk-papf-papg | electron microscopy | D | — | — |
| P15319 | AlphaFold monomer V2.0 prediction for chaperone protein papd (P15319) | predicted | A | — | 1 (best 0.41) |
Experiment against prediction
- 3ME0 chain A against the predicted model P15319: TM-score 1.00, RMSD 0.31 Å
- 3ME0 chain A against the predicted model P15319: TM-score 1.00, RMSD 0.31 Å
- 2XG4 chain A against the predicted model P15319: TM-score 1.00, RMSD 0.39 Å
- 2XG4 chain A against the predicted model P15319: TM-score 1.00, RMSD 0.39 Å
- 2XG5 chain A against the predicted model P15319: TM-score 0.99, RMSD 0.42 Å
- 2XG5 chain A against the predicted model P15319: TM-score 0.99, RMSD 0.42 Å
- 2J2Z chain A against the predicted model P15319: TM-score 0.99, RMSD 0.42 Å
- 2J2Z chain A against the predicted model P15319: TM-score 0.99, RMSD 0.42 Å
- 1N0L chain A against the predicted model P15319: TM-score 0.99, RMSD 0.46 Å
- 1N0L chain A against the predicted model P15319: TM-score 0.99, RMSD 0.46 Å
Elsewhere
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