UniProt P04778
Chlorophyll a-b binding protein 1, chloroplastic (P04778)
Chlorophyll a-b binding protein 1, chloroplastic (UniProt P04778): 4 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P04778
- Protein
- Chlorophyll a-b binding protein 1, chloroplastic
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 6
Structures
5 records of P04778 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5MDX | Cryo-EM structure of the PSII supercomplex from Arabidopsis thaliana | electron microscopy | G, N, Y, g, n, y, 1, 2, 3, 5, 6, 7 | CHL, CLA | — |
| 5MDX | Cryo-EM structure of the psii supercomplex from arabidopsis thaliana | electron microscopy | G, N, Y, g, n, y, 1, 2, 3, 5, 6, 7 | CHL, CLA | — |
| 7OUI | Structure of C2S2M2-type Photosystem supercomplex from Arabidopsis thaliana (digitonin-extracted) | electron microscopy | G, N, Y, g, n, y | CLA, CHL, LUT, NEX, AJP, LHG | — |
| 7OUI | Structure of C2S2M2-type photosystem supercomplex from arabidopsis thaliana (digitonin-extracted) | electron microscopy | G, N, Y, g, n, y | CLA, CHL, LUT, NEX, AJP, LHG | — |
| P04778 | AlphaFold monomer V2.0 prediction for chlorophyll a-B binding protein 1, chloroplastic (P04778) | predicted | A | — | — |
Ligands
- CHL · Chlorophyll B · in 4 records
- CLA · Chlorophyll A · in 4 records
- AJP · Digitonin · in 2 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 2 records
- LUT · (3R,3'R,6S)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol · in 2 records
- NEX · (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R, 6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol · in 2 records
Experiment against prediction
- 7OUI chain N against the predicted model P04778: TM-score 0.98, RMSD 0.78 Å
- 7OUI chain N against the predicted model P04778: TM-score 0.98, RMSD 0.78 Å
- 7OUI chain n against the predicted model P04778: TM-score 0.98, RMSD 0.78 Å
- 7OUI chain n against the predicted model P04778: TM-score 0.98, RMSD 0.78 Å
- 7OUI chain g against the predicted model P04778: TM-score 0.98, RMSD 0.82 Å
- 7OUI chain g against the predicted model P04778: TM-score 0.98, RMSD 0.82 Å
- 7OUI chain G against the predicted model P04778: TM-score 0.98, RMSD 0.82 Å
- 7OUI chain G against the predicted model P04778: TM-score 0.98, RMSD 0.82 Å
- 7OUI chain y against the predicted model P04778: TM-score 0.97, RMSD 0.91 Å
- 7OUI chain y against the predicted model P04778: TM-score 0.97, RMSD 0.91 Å
Elsewhere
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