UniProt E6MVV9
EarP (E6MVV9)
EarP (UniProt E6MVV9): 8 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 22 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- E6MVV9
- Protein
- EarP
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 22 · 4 records with a druggable one
Structures
9 records of E6MVV9 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5WXI | EarP bound with dTDP-rhamnose (soaked) | x-ray diffraction | A, B | TRH, SO4 | 6 (best 0.79) |
| 5WXI | Earp bound with dtdp-rhamnose (soaked) | x-ray diffraction | A, B | TRH, SO4 | — |
| 5WXJ | Apo EarP | x-ray diffraction | A, B | SO4 | 7 (best 0.84) |
| 5WXJ | APO EARP | x-ray diffraction | A, B | SO4 | — |
| 5WXK | EarP bound with domain I of EF-P | x-ray diffraction | A | TYD, SO4, NI | 5 (best 0.81) |
| 5WXK | Earp bound with domain I of ef-P | x-ray diffraction | A | TYD, SO4, NI | — |
| 5XVR | EarP bound with dTDP-rhamnose (co-crystal) | x-ray diffraction | A, B | TRH, SO4 | 4 (best 0.83) |
| 5XVR | Earp bound with dtdp-rhamnose (co-crystal) | x-ray diffraction | A, B | TRH, SO4 | — |
| E6MVV9 | AlphaFold monomer V2.0 prediction for protein-arginine rhamnosyltransferase (E6MVV9) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5WXJ chain A against the predicted model E6MVV9: TM-score 0.99, RMSD 0.64 Å
- 5WXJ chain A against the predicted model E6MVV9: TM-score 0.99, RMSD 0.64 Å
- 5WXI chain A against the predicted model E6MVV9: TM-score 0.99, RMSD 0.74 Å
- 5WXI chain A against the predicted model E6MVV9: TM-score 0.99, RMSD 0.74 Å
- 5XVR chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.75 Å
- 5XVR chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.75 Å
- 5WXI chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.79 Å
- 5WXI chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.79 Å
- 5WXJ chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.75 Å
- 5WXJ chain B against the predicted model E6MVV9: TM-score 0.99, RMSD 0.75 Å
Elsewhere
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