Ligand · TRH
TRH · 2'-deoxy-thymidine-beta-L-rhamnose
TRH, 2'-deoxy-thymidine-beta-L-rhamnose (C16 H26 N2 O15 P2, 548.3 g/mol), in the MolNFT structures on GenesisL1: bound in 14 records (9 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…
- Component
- TRH
- Formula
- C16 H26 N2 O15 P2
- Class
- ligand
- Structures
- 14
- PDB entries
- 9
Binding sites
TRH in 14 structures; the first of them:
- 5IFY · Crystal structure of Glucose-1-phosphate thymidylyltransferase from Burkholderia… · TRH A500 · binds LEU8, ALA9, GLY10, GLY11, GLN26, GLN82, PRO85, ASP86 and 17 more
- 5NV8 · Structural basis for EarP-mediated arginine glycosylation of translation elongation… · TRH A401 · binds ASP13, TYR15, GLY16, ASP17, GLY19, ARG23, PHE191, TYR193 and 14 more
- 5WXI · EarP bound with dTDP-rhamnose (soaked) · TRH A401 · binds ILE15, ASP16, PHE18, GLY19, ASP20, GLY22, VAL23, ARG26 and 18 more
- 5XVR · EarP bound with dTDP-rhamnose (co-crystal) · TRH A401 · binds ILE15, PHE18, GLY19, ASN20, GLY22, VAL23, LEU52, TYR115 and 17 more
- 6J7K · Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha · TRH A401 · binds ASN13, TYR14, GLY15, ASP16, GLY18, ILE48, TYR112, PHE190 and 12 more
- 6N0U · Crystal structure of a glucose-1-phosphate thymidylyltransferase from Burkholderia… · TRH A500 · binds LEU8, ALA9, GLY10, GLY11, GLN26, GLN82, PRO85, ASP86 and 18 more
- 7VCH · Crystal structure of Neisseria meningitidis EarP bound TDP-L-Rhamnose · TRH A401 · binds ILE15, ASP16, ASN17, PHE18, GLY19, ASP20, GLY22, ARG26 and 19 more
- 8BZ7 · Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose · TRH A701 · binds PRO26, THR27, TYR28, ASP59, ASN86, GLY88, TRP89, GLY90 and 10 more
- 8BZ8 · Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose · TRH A703 · binds PRO26, THR27, TYR28, ASP59, ASN86, GLY88, TRP89, GLY90 and 10 more
- 5NV8 · Structural basis for earp-mediated arginine glycosylation of translation elongation… · TRH A401 · binds ASP13, TYR15, GLY16, ASP17, GLY19, PHE191, TYR193, PRO217 and 10 more
- 5WXI · Earp bound with dtdp-rhamnose (soaked) · TRH A401 · binds ILE15, PHE18, GLY19, ASP20, LEU52, TYR115, PHE185, TYR187 and 12 more
- 5XVR · Earp bound with dtdp-rhamnose (co-crystal) · TRH A401 · binds PHE18, GLY19, ASN20, LEU52, TYR115, PHE185, TYR187, ALA211 and 11 more
- 6J7K · Crystal structure of pseudomonas aeruginosa earp in complex with tdp- rha · TRH A401 · binds ASN13, TYR14, GLY15, ASP16, GLY18, ILE48, TYR112, PHE190 and 12 more
- 6N0U · Crystal structure of a glucose-1-phosphate thymidylyltransferase from burkholderia… · TRH A500 · binds LEU8, GLY10, GLY11, GLN26, GLN82, PRO85, ASP86, GLY87 and 17 more
Residues it binds most
GLY 40, ASP 40, TYR 40, PRO 40, PHE 15, LEU 24, ARG 39, GLU 33, GLN 28, THR 26 (residue and the binding sites it lines).
Found with
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