GL1X · GenesisL1 explorer

Ligand · YF3

YF3 · 2-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}propane-1-thiol

YF3, 2-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}propane-1-thiol (C9 H16 N4 S, 212.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
YF3
Formula
C9 H16 N4 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

YF3 in 4 structures; the first of them:

  • 1T9A · Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea… · YF3 A700 · binds TYR113, PRO114, GLY115, GLU139, THR162, PRO165, GLY166, ASN169 and 8 more
  • 1T9B · Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea… · YF3 A1705 · binds VAL497, GLY523, THR524, MET525, MET555, GLN580, MET582, VAL583 and 10 more
  • 1T9A · Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea… · YF3 A700 · binds TYR113, PRO114, GLY115, GLU139, THR162, PRO165, GLY166, ASN169 and 8 more
  • 1T9B · Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea… · YF3 A1705 · binds VAL497, GLY523, THR524, MET525, MET555, GLN580, MET582, VAL583 and 10 more

Residues it binds most

GLY 4, MET 4, GLN 4, PRO 4, THR 4, VAL 4, ASN 4, GLU 4, TYR 4 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • K · Potassium ion
  • MG · Magnesium ion
  • 1CS · 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-L,3,5-triazin-2-yl)urea
  • 1TB · Methyl 2-[4-methoxy-6-methyl-1,3,5-trazin-2-yl(methyl)carbamoylsulfamoyl]benzoate
  • NSP · 5-(aminomethyl)-2-methylpyrimidin-4-amine
  • P22 · Ethyl dihydrogen diphosphate
  • P23 · Propyl trihydrogen diphosphate
  • P25 · Pentyl trihydrogen diphosphate
  • YF4 · 5-{[ethyl(methyl)amino]methyl}-2-methyl-5,6-dihydropyrimidin-4-amine

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