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Ligand · XDV

XDV · 2-[2-(2-aminoethoxy)ethoxy]acetamide

XDV, 2-[2-(2-aminoethoxy)ethoxy]acetamide (C6 H14 N2 O3, 162.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
XDV
Formula
C6 H14 N2 O3
Class
ligand
Structures
1
PDB entries
1

Binding sites

XDV in 1 structure; the first of them:

  • 7KZL · Cyclopentane peptide nucleic acid in complex with DNA · XDV B10

Found with

  • XDD · N-[(1S,2S)-2-aminocyclopentyl]-N-[(6-amino-9H-purin-9-yl)acetyl]glycine
  • XDJ · N-[(1S,2S)-2-aminocyclopentyl]-N-[(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)acetyl]glycine
  • XDY · N-[(1S,2S)-2-aminocyclopentyl]-N-[(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine
  • ZN · Zinc ion
  • IOD · Iodide ion
  • EDO · 1,2-ethanediol
  • MOH · Methanol

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