Ligand · SOG
SOG · octyl 1-thio-beta-D-glucopyranoside
SOG, octyl 1-thio-beta-D-glucopyranoside (C14 H28 O5 S, 308.4 g/mol), in the MolNFT structures on GenesisL1: bound in 27 records (18 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…
- Component
- SOG
- Formula
- C14 H28 O5 S
- Class
- ligand
- Structures
- 27
- PDB entries
- 18
Binding sites
SOG in 27 structures; the first of them:
- 5G53 · Structure of the adenosine A2A receptor bound to an engineered G protein · SOG A501 · binds GLY23, LEU26, VAL27, PRO285, PHE286, ALA289, TYR290, ARG296 and 2 more
- 5NX2 · Crystal structure of thermostabilised full-length GLP-1R in complex with a truncated… · SOG A604 · binds GLU138, GLN140, GLY377, THR378, ARG380, PHE381
- 6A2W · Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum · SOG A413
- 6TOS · Crystal structure of the Orexin-1 receptor in complex with GSK1059865 · SOG A407 · binds ASP209, LEU210, LYS213, ILE214, SER217, VAL323, PHE220, ILE221 and 1 more
- 6TOT · Crystal structure of the Orexin-1 receptor in complex with lemborexant · SOG A405 · binds ARG37, ASP38, TYR41, PRO42, TYR45, ALA46, LEU49, ILE108 and 1 more
Residues it binds most
LEU 138, ALA 113, PHE 129, VAL 127, ARG 95, LYS 83, TRP 81, SER 64, TYR 54, ILE 58 (residue and the binding sites it lines).
Found with
- PGW · (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
- SO4 · Sulfate ion
- NA · Sodium ion
- PG4 · Tetraethylene glycol
- LMT · Dodecyl-beta-D-maltoside
- CIT · Citric acid
- A86 · (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate
- CLA · Chlorophyll A
- DD6 · (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol
- DGD · Digalactosyl diacyl glycerol (dgdg)
- KC1 · Chlorophyll c1
- KC2 · Chlorophyll c2
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