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Ligand · MBG

MBG · methyl beta-D-galactopyranoside

MBG, methyl beta-D-galactopyranoside (C7 H14 O6, 194.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
MBG
Formula
C7 H14 O6
Class
sugar
Structures
4
PDB entries
4

Binding sites

MBG in 4 structures; the first of them:

  • 5EQ3 · Crystal structure of the SrpA adhesin from Streptococcus sanguinis with a sialyl… · MBG C1 · binds PHE294, THR346
  • 5J4T · Structure of tetrameric jacalin complexed with GlcNAc beta-(1,3) Gal-beta-OMe · MBG I1 · binds GLY1, PHE47, TYR78, VAL80, GLY121, TYR122, TRP123, ASP125
  • 5J4X · Structure of tetrameric jacalin complexed with Gal beta-(1,3) Gal-beta-OMe · MBG I1 · binds GLY1, TYR78, VAL80, GLY121, TYR122, TRP123, ASP125
  • 8Z48 · Beta-galactosidase from Bacteroides xylanisolvens (complex with methyl… · MBG A601 · binds ASN119, GLU190, TRP288, GLN291, ASP326, TYR328, GLU350, ASP494

Residues it binds most

ASP 7, TYR 7, GLU 4, TRP 7, GLY 3, ASN 4, GLN 4, PHE 3, VAL 3, THR 1 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • CA · Calcium ion
  • NA · Sodium ion
  • GAL · beta-D-galactopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • NGC · N-glycolyl-alpha-neuraminic acid
  • ACT · Acetate ion
  • IPA · Isopropyl alcohol
  • PEG · Di(hydroxyethyl)ether

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