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Ligand · LYI

LYI · [(2~{R})-1-octadecoxy-3-[oxidanyl-[(2~{R},3~{R},5~{S},6~{R})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] (5~{Z},8~{Z},11~{Z},14~{Z})-icosa-5,8,11,14-tetraenoate

LYI, [(2~{R})-1-octadecoxy-3-[oxidanyl-[(2~{R},3~{R},5~{S},6~{R})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] (5~{Z},8~{Z},11~{Z},14~{Z})-icosa-5,8,11,14-tetraenoate (C47 H85 O12 P, 873.1 g/mol), in the MolNFT…

Component
LYI
Formula
C47 H85 O12 P
Class
ligand
Structures
1
PDB entries
1

Binding sites

LYI in 1 structure; the first of them:

  • 8K9T · Cryo-EM structure of the products-bound PGAP1(Bst1)-S327A from Chaetonium thermophilum · LYI A1506 · binds LEU160, VAL163, ILE164, GLY229, ASN230, ALA231, GLY232, GLN236 and 18 more

Residues it binds most

LEU 1, ILE 1, VAL 1, ALA 1, GLN 1, GLY 1, HIS 1, TYR 1, ARG 1, ASN 1 (residue and the binding sites it lines).

Found with

  • 05E · 2-azanylethyl [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen phosphate
  • 80Y · 2-azanylethyl [(2R,3S,4S,5S,6S)-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methyl hydrogen phosphate
  • CLR · Cholesterol
  • PA1 · 2-amino-2-deoxy-alpha-D-glucopyranose
  • PLM · Palmitic acid
  • MAN · alpha-D-mannopyranose

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