Ligand · LIM
LIM · 3-oxo-pentadecanoic acid
LIM, 3-oxo-pentadecanoic acid (C15 H28 O3, 256.4 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- LIM
- Formula
- C15 H28 O3
- Class
- ligand
- Structures
- 3
- PDB entries
- 3
Binding sites
LIM in 3 structures; the first of them:
- 1FCP · Ferric hydroxamate uptake receptor (fhua) from E.COLI in complex with bound… · LIM A906 · binds TYR284, GLN298, LEU300, PHE355, PHE380, ARG382, LYS439
- 1UJW · Structure of the complex between BtuB and Colicin E3 Receptor binding domain · LIM A812 · binds TRP144, GLY145, SER146, LEU549, VAL551, GLY563, LYS564, ILE565 and 3 more
- 2FCP · Ferric hydroxamate uptake receptor (fhua) from E.COLI · LIM A806 · binds TYR284, GLN298, LEU300, PHE355, VAL357, PHE380, ARG382, LYS439
Residues it binds most
LEU 4, PHE 2, VAL 3, LYS 3, TRP 2, TYR 3, ARG 2, GLN 2, GLY 1, THR 2 (residue and the binding sites it lines).
Found with
- AAE · Acetoacetic acid
- GP1 · 2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose
- EA2 · Aminoethanolpyrophosphate
- LIL · 2-tridecanoyloxy-pentadecanoic acid
- NI · Nickel (II) ion
- GLA · alpha-D-galactopyranose
- GLC · alpha-D-glucopyranose
- GMH · L-glycero-alpha-D-manno-heptopyranose
- GP4 · 2-amino-2-deoxy-4-O-phosphono-alpha-D-glucopyranose
- GPH · 4-O-phosphono-D-glycero-beta-D-manno-heptopyranose
- KDO · 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid
- FCI · Ferricrocin-iron
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