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Ligand · IBL

IBL · Azo-Combretastatin A4 (cis)

IBL, Azo-Combretastatin A4 (cis) (C16 H18 N2 O5, 318.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
IBL
Formula
C16 H18 N2 O5
Class
ligand
Structures
4
PDB entries
4

Binding sites

IBL in 4 structures; the first of them:

  • 7YZ6 · Molecular snapshots of drug release from tubulin: Dark (steady state) · IBL B601 · binds THR179, ALA180, VAL181, VAL236, CYS239, LEU240, LEU246, ALA248 and 15 more
  • 8QEA · Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution… · IBL B702 · binds THR179, ALA180, VAL181, VAL236, CYS239, LEU240, LEU246, ALA248 and 16 more
  • 8QL2 · Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution… · IBL B501 · binds THR179, ALA180, VAL181, VAL236, CYS239, LEU240, LEU246, ALA248 and 15 more
  • 8QL9 · Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution… · IBL B502 · binds THR179, ALA180, VAL181, GLY235, VAL236, CYS239, LEU240, ALA248 and 15 more

Residues it binds most

ALA 4, VAL 4, LEU 4, THR 4, ASN 4, ILE 4, LYS 4, ASP 4, CYS 4, MET 4 (residue and the binding sites it lines).

Found with

  • GTP · Guanosine-5'-triphosphate
  • CA · Calcium ion
  • MG · Magnesium ion
  • GDP · Guanosine-5'-diphosphate

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