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Ligand · I55

I55 · [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate

I55, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3…

Component
I55
Formula
C15 H25 N7 O8
Class
ligand
Structures
7
PDB entries
7

Binding sites

I55 in 7 structures; the first of them:

  • 7XX0 · C281S glycylthricin complex · I55 A702 · binds PHE279, ASN299, ALA300, CYS302, ARG306, SER310, GLU312, GLU313 and 9 more
  • 7XXC · Orf1-glycine-glycylthricin complex · I55 A702 · binds PHE279, ASN299, ALA300, CYS302, ARG306, SER310, GLU312, GLU313 and 9 more
  • 7XXR · Orf1 R342A-glycylthricin complex · I55 A702 · binds PHE279, ASN299, ALA300, CYS302, ARG306, SER310, GLU312, GLU313 and 9 more
  • 7XYL · E426Q-glycine-glycylthricin complex · I55 A1147 · binds PHE279, ASN299, ALA300, CYS302, ARG306, SER310, GLU312, GLU313 and 9 more
  • 7Y0X · Orf1-glycine complex · I55 A702 · binds PHE279, ASN299, ALA300, CYS302, ARG306, SER310, GLU312, GLU313 and 9 more

Residues it binds most

THR 55, GLU 55, PHE 55, ASN 48, ALA 48, SER 55, TRP 55, CYS 47, GLY 49, ARG 48 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • GLY · Glycine
  • COA · Coenzyme A

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