Ligand · GLY
GLY · Glycine
GLY, Glycine (C2 H5 N O2, 75.1 g/mol), in the MolNFT structures on GenesisL1: bound in 103 records (103 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- GLY
- Formula
- C2 H5 N O2
- Class
- ligand
- Structures
- 103
- PDB entries
- 103
Binding sites
GLY in 103 structures; the first of them:
- 4WGJ · Crystal Structure of BepC protein (VirB-translocated Bartonella effector protein) with… · GLY A303 · binds ARG157, PHE173, ILE176, THR177, LYS178, MET181
- 4YKI · Mnemiopsis leidyi ML032222a iGluR LBD glycine complex · GLY A301 · binds GLU17, PHE63, ASP91, LEU92, SER93, ARG98, ARG144, HIS145 and 2 more
- 4ZDM · Pleurobrachia bachei iGluR3 LBD Glycine Complex · GLY A301 · binds PHE66, ALA94, LEU95, SER96, ARG101, ARG147, ASN148, GLU191 and 1 more
- 5CMB · Mnemiopsis leidyi ML032222a iGluR LBD R703K mutant glycine complex · GLY A301 · binds PHE63, ASP91, LEU92, SER93, ARG98, LYS144, HIS145, GLU188 and 1 more
- 5H8H · Structure of the human GluN1/GluN2A LBD in complex with GNE3419 · GLY B302 · binds PHE93, PRO125, LEU126, THR127, ARG132, SER180, SER181, TRP224 and 2 more
- 5I2K · Structure of the human GluN1/GluN2A LBD in complex with… · GLY B301 · binds PHE93, PRO125, LEU126, THR127, ARG132, SER180, SER181, TRP224 and 2 more
- 5I2N · Structure of the human GluN1/GluN2A LBD in complex with… · GLY B302 · binds PHE93, PRO125, LEU126, THR127, ARG132, SER180, SER181, TRP224 and 2 more
- 5KCJ · Structure of the human GluN1/GluN2A LBD in complex with GNE6901 · GLY B301 · binds PHE93, PRO125, LEU126, THR127, ARG132, SER180, SER181, TRP224 and 2 more
- 5KDT · Structure of the human GluN1/GluN2A LBD in complex with GNE0723 · GLY B301 · binds PHE93, PRO125, LEU126, THR127, ARG132, SER180, SER181, TRP224 and 2 more
- 5OAN · Crystal structure of mutant AChBP in complex with glycine (T53F, Q74R, Y110A, I135S… · GLY B601 · binds GLU162, SER163, TRP164, TYR205, TYR72, ARG74, SER135
- 5OJ4 · Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH)… · GLY A512 · binds ARG338, LEU341, LYS342, GLU345, ARG400, ASP272
- 5VIJ · Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and… · GLY A1001 · binds PHE92, PRO124, LEU125, THR126, ARG131, SER179, SER180, TRP223 and 2 more
- 5VYJ · Crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from… · GLY A1001 · binds TRP333, ARG334, LEU97, SER100, PHE225, ARG226, THR227, GLU229 and 1 more
- 5X2Q · Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in… · GLY A951 · binds PHE140, THR141, SER142, GLY163, CYS164, SER165, GLY166, PHE213
- 6D66 · Crystal structure of the human dual specificity 1 catalytic domain (C258S) as a maltose… · GLY A1403 · binds PHE93, ALA325, GLN326, GLY328, ILE330
- 6DW7 · SAMHD1 without Catalytic Nucleotides · GLY A704 · binds LYS312, ARG366, GLY508
- 6EVL · Crystal structure of an unlignaded peptide-substrate-binding domain of human type II… · GLY A303 · binds TYR158, ASP192, TYR193, TYR196, ARG223
- 6FIZ · Crystal Structure of CNG mimicking NaK-EAPP mutant (T67A) cocrystallized with K+ · GLY A201 · binds LEU48, ASP52, TYR55, PHE56, ALA67, PRO69
Residues it binds most
PHE 176, SER 221, ARG 237, LEU 198, TYR 159, THR 170, GLU 125, GLY 84, PRO 67, ASP 88 (residue and the binding sites it lines).
Found with
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
- EDO · 1,2-ethanediol
- SO4 · Sulfate ion
- GOL · Glycerol
- GLU · Glutamic acid
- CL · Chloride ion
- PEG · Di(hydroxyethyl)ether
- MG · Magnesium ion
- BMA · beta-D-mannopyranose
- ALA · Alanine
- PIO · [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2, 3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
- NA · Sodium ion
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