GL1X · GenesisL1 explorer

Ligand · I3C

I3C · 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid

I3C, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid (C8 H4 I3 N O4, 558.8 g/mol), in the MolNFT structures on GenesisL1: bound in 20 records (16 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
I3C
Formula
C8 H4 I3 N O4
Class
ligand
Structures
20
PDB entries
16

Binding sites

I3C in 20 structures; the first of them:

  • 5E9O · Spirochaeta thermophila X module - CBM64 - mutant G504A · I3C B601 · binds TYR459, ASN503, ALA520, SER521, ASP522, TYR526
  • 5FOR · Cryptic TIR · I3C A1141 · binds LEU27, SER30, SER31, ARG32, GLN33, PRO127, VAL131
  • 6EG7 · BbvCI B2 dimer with I3C clusters · I3C A305 · binds VAL85, PRO115, ALA116, LYS117, ASP144, HIS145, ASP146
  • 6JZE · Crystal structure of VASH2-SVBP complex with the magic triangle I3C · I3C A401 · binds LYS135, LEU159, SER181, PHE182, HIS192, HIS193, VAL194, LYS247 and 1 more
  • 6LCM · Crystal structure of chloroplast resolvase ZmMOC1 with the magic triangle I3C · I3C C201 · binds ASP124, ARG127, GLN128, SER131, ASP138, LEU141, LYS142
  • 6NQZ · Flagellar protein FcpB from Leptospira interrogans · I3C A301 · binds LYS67, ASN69, THR74, PRO75, ALA76, ILE77
  • 5L1A · Crystal structure of uncharacterized protein LPG2271 from legionella pneumophila · I3C A201 · binds GLU60, GLU64, ASN67, THR88, ILE89, THR92
  • 5U84 · Acid ceramidase (ASAH1, acdase) from common minke whale, CYS143ALA, uncleaved · I3C A406
  • 6EG7 · Bbvci B2 dimer with I3C clusters · I3C A305 · binds VAL85, PRO115, ALA116, LYS117, ASP144, HIS145, ASP146

Residues it binds most

LYS 36, SER 24, ALA 24, ARG 25, ASP 18, GLU 19, VAL 22, ASN 19, PRO 18, HIS 15 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • CL · Chloride ion
  • IOD · Iodide ion
  • PEG · Di(hydroxyethyl)ether
  • CA · Calcium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • GOL · Glycerol
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • MAN · alpha-D-mannopyranose
  • 1PE · Pentaethylene glycol
  • FLC · Citrate anion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.