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Ligand · HQH

HQH · Piericidin A

HQH, Piericidin A (C25 H37 N O4, 415.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HQH
Formula
C25 H37 N O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

HQH in 2 structures; the first of them:

  • 6Q8O · Respiratory complex I from thermus thermophilus with bound piericidin a · HQH 4501 · binds GLN33, SER36, HIS38, GLY39, VAL40, TYR87, THR135, LEU138 and 10 more
  • 6ZTQ · Cryo-EM structure of respiratory complex I from mus musculus inhibited by piericidin a at… · HQH D501 · binds THR59, GLY61, LEU62, ALA63, ALA66, MET70, PHE86, HIS59 and 6 more

Residues it binds most

LEU 3, GLY 3, THR 3, VAL 3, GLN 2, PHE 3, ALA 2, HIS 3, MET 3, TYR 3 (residue and the binding sites it lines).

Found with

  • FES · Fe2/s2 (inorganic) cluster
  • FMN · Flavin mononucleotide
  • SF4 · Iron/sulfur cluster
  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • ATP · Adenosine-5'-triphosphate
  • CDL · Cardiolipin
  • EHZ · ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate
  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate
  • PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine
  • ZN · Zinc ion

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