Ligand · C

C · Cytidine-5'-monophosphate

C, Cytidine-5'-monophosphate (C9 H14 N3 O8 P, 323.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component: C
Formula: C9 H14 N3 O8 P
Class: ligand
Structures: 3
PDB entries: 3

Binding sites

C in 3 structures; the first of them:

7PD3 · Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7… · C 4207 · binds ARG84
7C47 · The crystal structure of trypanosoma brucei RNase D : cmp complex · C A403 · binds ASP141, ARG143, GLN164, ARG180, GLY182, PRO279, ALA280
7PA4 · Crystal structure of CD73 in complex with cmp in the open form · C A606 · binds ARG354, ASN390, GLY392, GLY393, ARG395, PHE417, GLY447, PHE500 and 1 more

Residues it binds most

LYS 10, ARG 8, GLY 10, A 6, PRO 6, VAL 6, ALA 4, ASN 4, C 4, G 4 (residue and the binding sites it lines).

Found with

ZN · Zinc ion
A · Adenosine-5'-monophosphate
G · Guanosine-5'-monophosphate
GCP · Phosphomethylphosphonic acid guanylate ester
PNS · 4'-phosphopantetheine
U · Uridine-5'-monophosphate
CA · Calcium ion
MG · Magnesium ion
MN · Manganese (II) ion
CL · Chloride ion
GOL · Glycerol

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