Ligand · BGL
BGL · 2-O-octyl-beta-D-glucopyranose
BGL, 2-O-octyl-beta-D-glucopyranose (C14 H28 O6, 292.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…
- Component
- BGL
- Formula
- C14 H28 O6
- Class
- sugar
- Structures
- 4
- PDB entries
- 4
Binding sites
BGL in 4 structures; the first of them:
- 5FGN · Integral membrane protein lipooligosaccharide phosphoethanolamine transferase A (EptA)… · BGL A601 · binds LEU57, LEU60, VAL64, THR188, HIS189, ILE191, SER194, ASN195 and 3 more
- 8IUG · Cryo-EM structure of the RC-LH core complex from roseiflexus castenholzii · BGL 3103 · binds PHE28, SER32, LEU25, PHE298, LYS301, MET302, PRO303, ILE304
- 8IUN · Cryo-EM structure of the CRT-LESS RC-LH core complex from roseiflexus castenholzii · BGL M706 · binds LEU613, VAL614, TRP620, PHE28, TRP17, SER18, LEU22
- 8K5O · Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris · BGL S104 · binds ALA27, PHE30, SER34, MET5, VAL7, ILE10, VAL14
Residues it binds most
PHE 21, LEU 14, VAL 14, TRP 9, GLY 12, SER 11, ILE 11, ARG 9, ALA 9, THR 7 (residue and the binding sites it lines).
Found with
- HEC · Heme C
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
- PEF · Di-palmitoyl-3-sn-phosphatidylethanolamine
- PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate
- UNL · Unknown ligand
- LMT · Dodecyl-beta-D-maltoside
- BCL · Bacteriochlorophyll A
- BPH · Bacteriopheophytin A
- CDL · Cardiolipin
- MQE · 2-methyl-3-[(2E,6E,10E,14E,18E,22E,26E,30E,34E,38E)-3, 7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34, 38,42-undecaen-1-yl]naphthalene-1,4-dione
- U4Z · gamma-Carotene
- CA · Calcium ion
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