Ligand · ABE
ABE · alpha-D-Abequopyranose
ABE, alpha-D-Abequopyranose (C6 H12 O4, 148.2 g/mol), in the MolNFT structures on GenesisL1: bound in 14 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- ABE
- Formula
- C6 H12 O4
- Class
- sugar
- Structures
- 14
- PDB entries
- 7
Binding sites
ABE in 14 structures; the first of them:
- 1MFA · Structure of a single-chain fv fragment complexed with a carbohydrate antigen at 1.7… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFB · High resolution structures of antibody Fab fragment complexed with cell-surface… · ABE A7 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFC · High resolution structures of antibody Fab fragment complexed with cell-surface… · ABE A4 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFD · The solution structure of a trisaccharide-antibody complex: comparison of NMR… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFE · Recognition of a cell-surface oligo-saccharide of pathogenic salmonella by an antibody… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1TYX · Title of tailspike-protein · ABE B7 · binds LEU283, ARG285, ASP303, THR307, GLU309, GLN335, LEU337, TRP365
- 2J60 · H-ficolin complexed to D-fucose · ABE A1277 · binds VAL226, SER234, CYS235, TYR236, TYR254, VAL264
- 1MFA · Structure of a single-chain fv fragment complexed with a carbohydrate antigen at 1.7… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFB · High resolution structures of antibody Fab fragment complexed with cell-surface… · ABE A7 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFC · High resolution structures of antibody Fab fragment complexed with cell-surface… · ABE A4 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFD · The solution structure of a trisaccharide-antibody complex: comparison of NMR… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1MFE · Recognition of a cell-surface oligo-saccharide of pathogenic salmonella by an antibody… · ABE A3 · binds HIS34, TRP93, TRP98, TRP283, HIS285, ALA300, PHE309, GLY350 and 3 more
- 1TYX · Title of tailspike-protein · ABE B7 · binds LEU283, ARG285, ASP303, THR307, GLU309, GLN335, LEU337, TRP365
- 2J60 · H-ficolin complexed to D-fucose · ABE A1277 · binds VAL226, SER234, CYS235, TYR236, TYR254, VAL264
Residues it binds most
TRP 12, HIS 10, GLY 10, TYR 14, VAL 6, ALA 10, PHE 10, SER 6, CYS 4, LEU 2 (residue and the binding sites it lines).
Found with
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