Ligand · 6ML

6ML · oxygen-damaged SF4

6ML, oxygen-damaged SF4 (Fe4 O2 S4, 383.6 g/mol), in the MolNFT structures on GenesisL1: bound in 22 records (13 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: 6ML
Formula: Fe4 O2 S4
Class: ligand
Structures: 22
PDB entries: 13

Binding sites

6ML in 22 structures; the first of them:

5JSH · The 3D structure of recombinant [NiFeSe] hydrogenase from Desulfovibrio Vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
5JSU · The 3D structure of the U489C variant of [NiFeSe] hydrogenase from Desulfovibrio vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
5JT1 · The 3D structure of Ni-reconstituted U489C variant of [NiFeSe] hydrogenase from… · 6ML A304 · binds CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119, THR120 and 7 more
6RTP · THE 3D STRUCTURE OF [NIFESE] HYDROGENASE G50T VaRIANT FROM DESULFOVIBRIO VULGARIS… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
6RUC · The 3D structure of [nifese] hydrogenase G491S variant from desulfovibrio vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
6Z7R · Structure of [NiFeSe] hydrogenase from Desulfovibrio vulgaris hildenborough pressurized… · 6ML A304 · binds GLN16, GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78 and 10 more
6Z8J · Structure of [NiFeSe] hydrogenase from Desulfovibrio vulgaris hildenborough pressurized… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z9G · Structure of [NiFeSe] hydrogenase G491A variant from Desulfovibrio vulgaris Hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
6Z9O · Structure of [NiFeSe] hydrogenase G491S variant from Desulfovibrio vulgaris Hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
6ZA1 · Structure of [NiFeSe] hydrogenase G491A variant from Desulfovibrio vulgaris Hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
5JSU · The 3D structure of the U489C variant of [nifese] hydrogenase from desulfovibrio vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
5JT1 · The 3D structure of ni-reconstituted U489C variant of [nifese] hydrogenase from… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, VAL118 and 9 more
6RTP · The 3D structure of [nifese] hydrogenase G50T variant from desulfovibrio vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6RU9 · The 3D structure of [nifese] hydrogenase G491A variant from desulfovibrio vulgaris… · 6ML A304 · binds CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119, THR120 and 7 more
6RUC · The 3D structure of [nifese] hydrogenase G491S variant from desulfovibrio vulgaris… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z7R · Structure of [nifese] hydrogenase from desulfovibrio vulgaris hildenborough pressurized… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 7 more
6Z8J · Structure of [nifese] hydrogenase from desulfovibrio vulgaris hildenborough pressurized… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z8M · Structure of [nifese] hydrogenase G491S variant from desulfovibrio vulgaris hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z8O · Structure of [nifese] hydrogenase G491A variant from desulfovibrio vulgaris hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z9G · Structure of [nifese] hydrogenase G491A variant from desulfovibrio vulgaris hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 8 more
6Z9O · Structure of [nifese] hydrogenase G491S variant from desulfovibrio vulgaris hildenborough… · 6ML A304 · binds CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119, THR120 and 7 more
6ZA1 · Structure of [nifese] hydrogenase G491A variant from desulfovibrio vulgaris hildenborough… · 6ML A304 · binds GLY17, CYS18, THR19, GLY20, CYS21, GLU77, GLY78, GLY119 and 7 more

Residues it binds most

GLY 33, CYS 33, THR 33, PRO 33, GLU 33, HIS 33, ARG 32, VAL 14, GLN 2 (residue and the binding sites it lines).

Found with

FCO · Carbonmonoxide-(dicyano) iron
SF4 · Iron/sulfur cluster
FE2 · Fe (II) ion
NI · Nickel (II) ion
H2S · Hydrosulfuric acid
CL · Chloride ion
GOL · Glycerol
OXY · Oxygen molecule
KR · Krypton

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