GL1X · GenesisL1 explorer

Ligand · 56D

56D · (3R)-2-oxo-3-phenylbutanoic acid

56D, (3R)-2-oxo-3-phenylbutanoic acid (C10 H10 O3, 178.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
56D
Formula
C10 H10 O3
Class
ligand
Structures
8
PDB entries
4

Binding sites

56D in 8 structures; the first of them:

  • 4KIB · Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MSE240, HIS243 and 7 more
  • 4M6X · Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MET240, HIS243 and 7 more
  • 4M6Y · Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MET240, HIS243 and 7 more
  • 4M71 · Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ILE132, CYS136, ILE139, MET240, HIS243, ASP272, ALA273 and 5 more
  • 4KIB · Crystal structure of methyltransferase from streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MSE240, HIS243 and 7 more
  • 4M6X · Mutant structure of methyltransferase from streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MET240, HIS243 and 7 more
  • 4M6Y · Mutant structure of methyltransferase from streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ARG127, ILE132, CYS136, ILE139, PHE144, MET240, HIS243 and 7 more
  • 4M71 · Mutant structure of methyltransferase from streptomyces hygroscopicus complexed with… · 56D A402 · binds TRP99, ILE132, CYS136, ILE139, MET240, HIS243, ASP272, ALA273 and 5 more

Residues it binds most

PHE 16, HIS 16, ILE 16, MET 12, ALA 16, ASP 16, CYS 16, LEU 16, TRP 16, ARG 12 (residue and the binding sites it lines).

Found with

  • HF2 · (2R)-2-hydroxy-3-phenylpropanoic acid
  • SAH · S-adenosyl-L-homocysteine
  • CA · Calcium ion
  • FE · Fe (III) ion
  • IOD · Iodide ion
  • OXY · Oxygen molecule

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.