MolNFT v2 · #27808 · protein
Trypsin-babim-ZN+2, pH 8.2
1XUG: “Trypsin-babim-ZN+2, pH 8.2”. X-ray diffraction at 1.5, 3 ligands (BAB, CA, ZN). MolNFT v2 #27808 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1XUG
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.5
- Source
- Bos taurus
- Molecule
- Trypsin
- EC
- 3.4.21.4
- UniProt
- P00760
- Ligands
- BAB, CA, ZN
Structure
x-ray diffraction · resolution 1.5 · 1 distinct chain · 10% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trypsin (EC 3.4.21.4) | protein | 223 | 10% helix, 34% strand | P00760 |
Ligands and binding sites
- BAB · Bis(5-amidino-benzimidazolyl)methane · ligand · chains A
- CA · Calcium ion · metal · chains A
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 1XUG · Trypsin-babim-ZN+2, pH 8.2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00760
- Elsewhere: RCSB PDB 1XUG · PDBe 1XUG · UniProt P00760
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