MolNFT v2 · #216048 · protein
Structure of the human Guanine Nucleotide-Binding Protein G(K) Subunit Alpha
8OY1 · Guanine nucleotide-binding protein G(i) subunit alpha-3: “Structure of the human Guanine Nucleotide-Binding Protein G(K) Subunit Alpha”. X-ray diffraction at 3.34, 1 ligand (GDP), 2 pockets (best druggability 0.77). MolNFT v2…
- PDB
- 8OY1
- Type
- protein
- Length
- 315 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.34
- Source
- Homo sapiens
- Molecule
- Guanine nucleotide-binding protein G(i) subunit alpha-3
- UniProt
- P08754
- Ligands
- GDP
- Pockets
- 2 · best druggability 0.77
Structure
x-ray diffraction · resolution 3.34 · 1 distinct chain · 50% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Guanine nucleotide-binding protein G(i) subunit alpha-3 | protein | 315 | 50% helix, 12% strand | P08754 |
Ligands and binding sites
- GDP · Guanosine-5'-diphosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 802 | 0.77 | 0.81 | 77 | GDP |
| 2 | 93 | 0.33 | 0.73 | 15 | empty |
Compared structures
- P08754 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08754
- Elsewhere: RCSB PDB 8OY1 · PDBe 8OY1 · UniProt P08754
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